_bookdown.yml

book_filename: "treedata"
chapter_name: "Chapter "
output_dir: pdf
repo: https://github.com/YuLab-SMU/treedata-book
delete_merged_file: true
language:
  label:
    fig: "FIGURE "
    tab: "TABLE "
  ui:
    chapter_name: "Chapter "
edit: "https://github.com/YuLab-SMU/treedata-book/edit/master/%s"
rmd_files: ["index.Rmd",
  "00_author.Rmd",
  "01_treeio_importing_tree.Rmd",
  "02_tidytree.Rmd",
  "03_treeio_exporting_tree.Rmd",
  "04_ggtree_visualization.Rmd",
  "05_ggtree_annotation.Rmd",
  "06_ggtree_manipulation.Rmd",
  "07_ggtree_tree_with_data.Rmd",
  "08_ggtree_with_silhouette.Rmd",
  "09_ggtree_tree_objects.Rmd",
  "10_ggtree_exts.Rmd",  
  "11_ggtree_exts-others.Rmd",
  "12_ggtree_utilities.Rmd",
  "13_ggtree_gallery.Rmd",
  "A-app-faq.Rmd",
  "A-app-tools.Rmd",
  "A-app-fig-tab.Rmd",
  "B-references.Rmd"]