NEWS.md

Version updates and changes

featuretable v0.0.10

• Remove reduce functions. They were more or less redundant with the apply functions.
• Update a lot of documentation!

featuretable v0.0.9

• Fix the S3 function exporting
• Update data and add Lee citation
• Add some microbiome overview, plotting, and R6/S3 function vignettes
• Add ggrepel to suggests
• Fix some of the plot unit tests so that it takes in package data rather than depend on DivNet

featuretable v0.0.8

• Update everything so it works with both R versions 3 and 4.
• This works by basically treating all strings as factors within FeatureTable code and test suite.

featuretable v0.0.7

• Add property and integration tests
• Add relative_abundance helper
• Add vignette about summarizing FeatureTables with plots
• Handle lots of edge cases involving factors and NAs in the collapse functions
• Add keep_hierarchy parameter to the collapse functions

featuretable v0.0.6

• Fix some bugs in the plot function
• Add other_feature_name parameter to plot function

featuretable v0.0.5

• Add some docs and tests
• Fix some bugs, imports, and suggests
• Drop variable prefix in collapse function
• Add wide_to_long helper function
• Add R6 and s3 plotting functions

featuretable v0.0.4

• Add collapse_samples.
• Add help docs for collapse functions.

featuretable v0.0.3

• Add lots of docs and examples!
• Add another data set to use in examples (available with: data(ft)).

featuretable v0.0.2

• Add some fancy stuff to the keep functions: query and restrict. These are used to mix data and metadata queries into a single predicate, and to restrict data queries to subsets of samples. Currently, they are only available in when keeping features.
• Add methods to collapse features based on metadata.
• Add various data utilities and helpers.

featuretable v0.0.1

The first version!