Split main #9
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Split main #9
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This commit splits malva-geno into two different steps: * malva-geno index will parse the reference, build the bloom filters and dump them into <vcfname>.malvax * malva-geno call will call the variants, loading the index from <vcfname>.malvax The interface needs reworking, right now both commands expect the same arguments.
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This will obviosuly break the interface. When/if merged, we'd better publish this on bioconda bumping the main version. |
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Changed the target branch to |
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WORK IN PROGRESS / EXPERIMENTAL, DON'T MERGEAdd index and call sub-commands
This commit splits malva-geno into two different steps:
The interface needs reworking, right now both commands expect the same arguments.