diff --git a/script.py b/script.py index 3d5e94c..ad87fc4 100644 --- a/script.py +++ b/script.py @@ -8,8 +8,8 @@ from percentageLungTissues.percentageLungTissues import * species_dict = {"human":"human_org", - "mice":"mice_TL", - "macaque":"mix_no_TL_a_mac"} + "mice":"mice_TL", + "macaque":"mix_no_TL_a_mac"} def ReadImage(path : str, image_extension =".mhd"): @@ -54,7 +54,6 @@ def read_dicom(path): sys.exit("Choose a correct one!") - images_path = glob.glob(images_folder + "/*.mhd") for path in images_path: @@ -69,4 +68,4 @@ def read_dicom(path): sitk.WriteImage(seg, os.path.join(results_folder, 'Res_' + name)) -getPercentageLungTissues(images_folder,results_folder) \ No newline at end of file +getPercentageLungTissues(images_folder,results_folder)