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DESCRIPTION
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DESCRIPTION
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Package: derecksLabTools
Title: A tool belt for my work at Coarfa lab Baylor College of Medicine
Version: 0.0.91
Authors@R:
person(given = "Dereck",
family = "de Mezquita",
role = c("aut", "cre"),
email = "[email protected]",
comment = c(ORCID = "0000-0002-9307-6762"))
Description: This package includes a number of tools; these all aid my workflow and process.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.2
Imports:
data.table (>= 1.14.0),
readxl (>= 1.3.1),
openxlsx (>= 4.2.3),
pheatmap (>= 1.0.12),
stringr (>= 1.4.0),
fs (>= 1.5.2),
ggrepel (>= 0.9.1),
sva (>= 3.42.0),
ggplot2 (>= 3.3.5),
ggfortify (>= 0.4.14)
Collate:
'dtcolnames.R'
'to.data.frame.R'
'to.matrix.R'
'CombatRNAseq.R'
'RNAseq_GSEAheatmaps.R'
'Volcano.R'
'getIndex.R'
'cite_RNAseqGSEA.R'
'excel2List.R'
'list2Excel.R'
'read.gmt.R'
'sig2UpDownGmt.R'
'summariseSignatures.R'
'table2tabs.R'
'tabs2table.R'
'valueCoordinates.R'
'write.gmt.R'