{2023.06}[2023b,sapphirerapids] EB 4.9.4 easystack for 2023b

[bedroge]

1 out of 2 required modules missing:

* SIONlib/1.7.7-GCCcore-13.2.0-tools (SIONlib-1.7.7-GCCcore-13.2.0-tools.eb)


7 out of 49 required modules missing:

* CubeLib/4.8.2-GCCcore-13.2.0 (CubeLib-4.8.2-GCCcore-13.2.0.eb)
* CubeWriter/4.8.2-GCCcore-13.2.0 (CubeWriter-4.8.2-GCCcore-13.2.0.eb)
* OPARI2/2.0.8-GCCcore-13.2.0 (OPARI2-2.0.8-GCCcore-13.2.0.eb)
* SIONlib/1.7.7-GCCcore-13.2.0-tools (SIONlib-1.7.7-GCCcore-13.2.0-tools.eb)
* PDT/3.25.2-GCCcore-13.2.0 (PDT-3.25.2-GCCcore-13.2.0.eb)
* OTF2/3.0.3-GCCcore-13.2.0 (OTF2-3.0.3-GCCcore-13.2.0.eb)
* Score-P/8.4-gompi-2023b (Score-P-8.4-gompi-2023b.eb)


1 out of 10 required modules missing:

* Cython/3.0.10-GCCcore-13.2.0 (Cython-3.0.10-GCCcore-13.2.0.eb)


13 out of 81 required modules missing:

* dill/0.3.8-GCCcore-13.2.0 (dill-0.3.8-GCCcore-13.2.0.eb)
* pyfaidx/0.8.1.1-GCCcore-13.2.0 (pyfaidx-0.8.1.1-GCCcore-13.2.0.eb)
* statsmodels/0.14.1-gfbf-2023b (statsmodels-0.14.1-gfbf-2023b.eb)
* hic-straw/1.3.1-foss-2023b (hic-straw-1.3.1-foss-2023b.eb)
* h5py/3.11.0-foss-2023b (h5py-3.11.0-foss-2023b.eb)
* RapidJSON/1.1.0-20240409-GCCcore-13.2.0 (RapidJSON-1.1.0-20240409-GCCcore-13.2.0.eb)
* utf8proc/2.9.0-GCCcore-13.2.0 (utf8proc-2.9.0-GCCcore-13.2.0.eb)
* Abseil/20240116.1-GCCcore-13.2.0 (Abseil-20240116.1-GCCcore-13.2.0.eb)
* RE2/2024-03-01-GCCcore-13.2.0 (RE2-2024-03-01-GCCcore-13.2.0.eb)
* Arrow/16.1.0-gfbf-2023b (Arrow-16.1.0-gfbf-2023b.eb)
* multiprocess/0.70.16-gfbf-2023b (multiprocess-0.70.16-gfbf-2023b.eb)
* cooler/0.10.2-foss-2023b (cooler-0.10.2-foss-2023b.eb)
* Mustache/1.3.3-foss-2023b (Mustache-1.3.3-foss-2023b.eb)


1 out of 3 required modules missing:

* GDRCopy/2.4-GCCcore-13.2.0 (GDRCopy-2.4-GCCcore-13.2.0.eb)


1 out of 60 required modules missing:

* GROMACS/2024.4-foss-2023b (GROMACS-2024.4-foss-2023b.eb)


5 out of 32 required modules missing:

* typing-extensions/4.10.0-GCCcore-13.2.0 (typing-extensions-4.10.0-GCCcore-13.2.0.eb)
* Rust/1.76.0-GCCcore-13.2.0 (Rust-1.76.0-GCCcore-13.2.0.eb)
* maturin/1.5.0-GCCcore-13.2.0-Rust-1.76.0 (maturin-1.5.0-GCCcore-13.2.0-Rust-1.76.0.eb)
* pydantic/2.7.4-GCCcore-13.2.0 (pydantic-2.7.4-GCCcore-13.2.0.eb)
* SlurmViewer/1.0.1-GCCcore-13.2.0 (SlurmViewer-1.0.1-GCCcore-13.2.0.eb)


5 out of 67 required modules missing:

* SDL2/2.28.5-GCCcore-13.2.0 (SDL2-2.28.5-GCCcore-13.2.0.eb)
* Graphene/1.10.8-GCCcore-13.2.0 (Graphene-1.10.8-GCCcore-13.2.0.eb)
* GStreamer/1.24.8-GCC-13.2.0 (GStreamer-1.24.8-GCC-13.2.0.eb)
* GST-plugins-base/1.24.8-GCC-13.2.0 (GST-plugins-base-1.24.8-GCC-13.2.0.eb)
* wxWidgets/3.2.6-GCC-13.2.0 (wxWidgets-3.2.6-GCC-13.2.0.eb)


2 out of 87 required modules missing:

* EveryBeam/0.6.1-foss-2023b (EveryBeam-0.6.1-foss-2023b.eb)
* DP3/6.2-foss-2023b (DP3-6.2-foss-2023b.eb)


2 out of 83 required modules missing:

* EveryBeam/0.6.1-foss-2023b (EveryBeam-0.6.1-foss-2023b.eb)
* WSClean/3.5-foss-2023b (WSClean-3.5-foss-2023b.eb)


1 out of 81 required modules missing:

* EveryBeam/0.6.1-foss-2023b (EveryBeam-0.6.1-foss-2023b.eb)

I don't see any overlap with #946, which also builds for 2023b. So, should be okay to build this one in parallel.

[eessi-bot]

Instance eessi-bot-mc-aws is configured to build for:

• architectures: x86_64/generic, x86_64/intel/haswell, x86_64/intel/sapphirerapids, x86_64/intel/skylake_avx512, x86_64/amd/zen2, x86_64/amd/zen3, aarch64/generic, aarch64/neoverse_n1, aarch64/neoverse_v1
• repositories: eessi.io-2023.06-compat, eessi.io-2023.06-software

[eessi-bot]

Instance eessi-bot-mc-azure is configured to build for:

• architectures: x86_64/amd/zen4
• repositories: eessi.io-2023.06-software, eessi.io-2023.06-compat

[eessi-bot-toprichard]

Instance rt-Grace-jr is configured to build for:

• architectures: aarch64/nvidia/grace
• repositories: eessi.io-2023.06-software

[bedroge]

bot: build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:sapphirerapids

[eessi-bot]

Updates by the bot instance eessi-bot-mc-aws (click for details)

• received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:sapphirerapids from bedroge

  • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:sapphirerapids

• handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:sapphirerapids resulted in:

  • submitted job 47880, for details & status see {2023.06}[2023b,sapphirerapids] EB 4.9.4 easystack for 2023b #947 (comment)

[eessi-bot]

Updates by the bot instance eessi-bot-mc-azure (click for details)

• received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:sapphirerapids from bedroge

  • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:sapphirerapids

• handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:sapphirerapids resulted in:

  • no jobs were submitted

[eessi-bot-toprichard]

Updates by the bot instance rt-Grace-jr (click for details)

• account bedroge has NO permission to send commands to the bot

[eessi-bot]

New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-intel-sapphirerapids for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2025.02/pr_947/47880

date	job status	comment
Feb 26 19:35:16 UTC 2025	submitted	job id 47880 awaits release by job manager
Feb 26 19:35:39 UTC 2025	released	job awaits launch by Slurm scheduler
Feb 26 19:41:02 UTC 2025	running	job 47880 is running
Feb 26 23:23:02 UTC 2025	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file slurm-47880.out ✅ no message matching FATAL: ✅ no message matching ERROR: ✅ no message matching FAILED: ✅ no message matching required modules missing: ✅ found message(s) matching No missing installations ✅ found message matching .tar.gz created! Artefacts eessi-2023.06-software-linux-x86_64-intel-sapphirerapids-1740610924.tar.gz size: 787 MiB (825913246 bytes) entries: 54735 modules under 2023.06/software/linux/x86_64/intel/sapphirerapids/modules/all Abseil/20240116.1-GCCcore-13.2.0.lua Arrow/16.1.0-gfbf-2023b.lua cooler/0.10.2-foss-2023b.lua CubeLib/4.8.2-GCCcore-13.2.0.lua CubeWriter/4.8.2-GCCcore-13.2.0.lua Cython/3.0.10-GCCcore-13.2.0.lua dill/0.3.8-GCCcore-13.2.0.lua DP3/6.2-foss-2023b.lua EveryBeam/0.6.1-foss-2023b.lua GDRCopy/2.4-GCCcore-13.2.0.lua Graphene/1.10.8-GCCcore-13.2.0.lua GROMACS/2024.4-foss-2023b.lua GST-plugins-base/1.24.8-GCC-13.2.0.lua GStreamer/1.24.8-GCC-13.2.0.lua h5py/3.11.0-foss-2023b.lua hic-straw/1.3.1-foss-2023b.lua maturin/1.5.0-GCCcore-13.2.0-Rust-1.76.0.lua multiprocess/0.70.16-gfbf-2023b.lua Mustache/1.3.3-foss-2023b.lua OPARI2/2.0.8-GCCcore-13.2.0.lua OTF2/3.0.3-GCCcore-13.2.0.lua PDT/3.25.2-GCCcore-13.2.0.lua pydantic/2.7.4-GCCcore-13.2.0.lua pyfaidx/0.8.1.1-GCCcore-13.2.0.lua RapidJSON/1.1.0-20240409-GCCcore-13.2.0.lua RE2/2024-03-01-GCCcore-13.2.0.lua Rust/1.76.0-GCCcore-13.2.0.lua Score-P/8.4-gompi-2023b.lua SDL2/2.28.5-GCCcore-13.2.0.lua SIONlib/1.7.7-GCCcore-13.2.0-tools.lua SlurmViewer/1.0.1-GCCcore-13.2.0.lua statsmodels/0.14.1-gfbf-2023b.lua typing-extensions/4.10.0-GCCcore-13.2.0.lua utf8proc/2.9.0-GCCcore-13.2.0.lua WSClean/3.5-foss-2023b.lua wxWidgets/3.2.6-GCC-13.2.0.lua software under 2023.06/software/linux/x86_64/intel/sapphirerapids/software Abseil/20240116.1-GCCcore-13.2.0 Arrow/16.1.0-gfbf-2023b cooler/0.10.2-foss-2023b CubeLib/4.8.2-GCCcore-13.2.0 CubeWriter/4.8.2-GCCcore-13.2.0 Cython/3.0.10-GCCcore-13.2.0 dill/0.3.8-GCCcore-13.2.0 DP3/6.2-foss-2023b EveryBeam/0.6.1-foss-2023b GDRCopy/2.4-GCCcore-13.2.0 Graphene/1.10.8-GCCcore-13.2.0 GROMACS/2024.4-foss-2023b GST-plugins-base/1.24.8-GCC-13.2.0 GStreamer/1.24.8-GCC-13.2.0 h5py/3.11.0-foss-2023b hic-straw/1.3.1-foss-2023b maturin/1.5.0-GCCcore-13.2.0-Rust-1.76.0 multiprocess/0.70.16-gfbf-2023b Mustache/1.3.3-foss-2023b OPARI2/2.0.8-GCCcore-13.2.0 OTF2/3.0.3-GCCcore-13.2.0 PDT/3.25.2-GCCcore-13.2.0 pydantic/2.7.4-GCCcore-13.2.0 pyfaidx/0.8.1.1-GCCcore-13.2.0 RapidJSON/1.1.0-20240409-GCCcore-13.2.0 RE2/2024-03-01-GCCcore-13.2.0 Rust/1.76.0-GCCcore-13.2.0 Score-P/8.4-gompi-2023b SDL2/2.28.5-GCCcore-13.2.0 SIONlib/1.7.7-GCCcore-13.2.0-tools SlurmViewer/1.0.1-GCCcore-13.2.0 statsmodels/0.14.1-gfbf-2023b typing-extensions/4.10.0-GCCcore-13.2.0 utf8proc/2.9.0-GCCcore-13.2.0 WSClean/3.5-foss-2023b wxWidgets/3.2.6-GCC-13.2.0 other under 2023.06/software/linux/x86_64/intel/sapphirerapids no other files in tarball
Feb 26 23:23:02 UTC 2025	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] ( 1/11) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.4-foss-2023b /b2b72766 @BotBuildTests:x86_64_intel_sapphirerapids+default P: perf: 73.684 ns/day (r:0, l:None, u:None) [ OK ] ( 2/11) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.1-foss-2023b /02920241 @BotBuildTests:x86_64_intel_sapphirerapids+default P: perf: 74.388 ns/day (r:0, l:None, u:None) [ OK ] ( 3/11) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:x86_64_intel_sapphirerapids+default P: perf: 617.616 timesteps/s (r:0, l:None, u:None) [ OK ] ( 4/11) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /775175bf @BotBuildTests:x86_64_intel_sapphirerapids+default P: latency: 2.13 us (r:0, l:None, u:None) [ OK ] ( 5/11) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /52707c40 @BotBuildTests:x86_64_intel_sapphirerapids+default P: latency: 1.83 us (r:0, l:None, u:None) [ OK ] ( 6/11) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /b1aacda9 @BotBuildTests:x86_64_intel_sapphirerapids+default P: latency: 4.0 us (r:0, l:None, u:None) [ OK ] ( 7/11) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /c6bad193 @BotBuildTests:x86_64_intel_sapphirerapids+default P: latency: 4.11 us (r:0, l:None, u:None) [ OK ] ( 8/11) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:x86_64_intel_sapphirerapids+default P: latency: 0.39 us (r:0, l:None, u:None) [ OK ] ( 9/11) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:x86_64_intel_sapphirerapids+default P: latency: 0.33 us (r:0, l:None, u:None) [ OK ] (10/11) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:x86_64_intel_sapphirerapids+default P: bandwidth: 12853.83 MB/s (r:0, l:None, u:None) [ OK ] (11/11) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:x86_64_intel_sapphirerapids+default P: bandwidth: 12929.81 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 11/11 test case(s) from 11 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file slurm-47880.out ✅ no message matching ERROR: ✅ no message matching [\s*FAILED\s*].*Ran .* test case