Releases: FZJ-INM1-BDA/siibra-python
Releases · FZJ-INM1-BDA/siibra-python
v0.4a80
Full Changelog: v0.4a78...v0.4a80
Julich Brain 3.1 EBRAINS release
v1.0a11
What's Changed
- Test: add cron job to test tutorials regularly by @AhmetNSimsek in #585
- Use
nilearn.resample_to_img
for merging fragments by @AhmetNSimsek in #572 - fix: python closure is weird by @xgui3783 in #587
- fix: add assertion error message by @xgui3783 in #588
- test: fast ci if regular branch, full suite if PR to main by @xgui3783 in #590
- fix: memory usage when warming the cache by @xgui3783 in #589
- Introduce merging Neuroglancer fragments by @AhmetNSimsek in #561
- feat: update how related regions are fetched by @xgui3783 in #582
- Read freesurfer .annot files as fsaverage mesh labels by @AhmetNSimsek in #575
- Reformat
feature.name
and reintorudcedata
andplot()
forCompoundFeature
s by @AhmetNSimsek in #568 - Test examples as a part of e2e. Create docs on push/PR to main and on publish by @AhmetNSimsek in #592
Full Changelog: v1.0a09...v1.0a11
v1.0a09
Full Changelog: v1.0a08...v1.0a09
- Fixed
commonns.connected_components
not masking statistical maps- Fixed assignment of volumes to sparsemaps (which was broken due to 1fccb91)
- Added tests to prevent regression
- Fixed minor bugs and typos
v1.0a08
What's Changed
- Exclude background from connected_components by @dickscheid in #567
- Use Github repo connector for configurations by @AhmetNSimsek in #543
- Print versions in version validation and fix bug by @AhmetNSimsek in #570
- urls -> doi_or_url and returns a list of string by @AhmetNSimsek in #571
- Fix: fetch specific label from gii labels by @AhmetNSimsek in #574
- fix: allen gene exp query w a list of genes by @AhmetNSimsek in #576
- fix: pointset intersection with boundingbox fails if no points inside by @dickscheid in #577
- use datasets of the spaces if templates don't have any specified by @AhmetNSimsek in #578
- Add Volume.evaluate_points() and fix voxel access for _points_inside by @dickscheid in #566
- New: experimental module, with draft classes for cortical patch sampling by @dickscheid in #579
Full Changelog: v1.0a06...v1.0a08
v1.0a06
What's Changed
- fix: takes long time to retrieve feature.dataset.name by @xgui3783 in #547
- fix: cancel previous workflows by @xgui3783 in #548
- Use codecov v3 by @AhmetNSimsek in #550
- Neuroglancer volume fetching by @AhmetNSimsek in #549
- Maint:
volume.fetch
by @AhmetNSimsek in #562 - feat: add encode URL point by @xgui3783 in #559
- fix: write lock for warmup by @xgui3783 in #563
- fix citation.CFF file
Full Changelog: v1.0a05...v1.0a06
v1.0a05
What's Changed
- Fix: from_pointset kde volume calculation by @AhmetNSimsek in #529
- feat: obtain colorscale of a connectivity profile by @AhmetNSimsek in #532
- Fix assigning uncertain points to labelled maps #526 by @AhmetNSimsek in #531
- Hotfix allen api paging by @AhmetNSimsek in #536
- refactor: warm cache by @xgui3783 in #537
- Fix image query by @AhmetNSimsek in #538
- fix: info uses siibra.retrieval module for local file cache by @xgui3783 in #544
- Increase intensity profile compounding speed by @AhmetNSimsek in #510
Full Changelog: v1.0a04...v1.0a05
v1.0a04
Full Changelog: v1.0a03...v1.0a04
Hot fix: restore the connection to the SparseIndex storage
v1.0a03
What's Changed
- Prerelease maint by @AhmetNSimsek in #522
- Maint: feature module by @AhmetNSimsek in #521
- Add the first location example by @AhmetNSimsek in #523
Full Changelog: v1.0a02...v1.0a03
v1.0a02
What's Changed
provider.boundingbox
->provider.get_boundingbox()
by @AhmetNSimsek in #515- Doc: run_stale_examples locally by @AhmetNSimsek in #514
- Add support for python 3.11 and 3.12 by @AhmetNSimsek in #519
Full Changelog: v1.0a01...v1.0a02
v1.0a01
What's Changed
- Introduce image volumes as an input for feature query by @AhmetNSimsek in #480
Full Changelog: v0.5a02...v1.0a01