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name = "weasyprint" -version = "63.1" +version = "64.0" description = "The Awesome Document Factory" optional = false python-versions = ">=3.9" files = [ - {file = "weasyprint-63.1-py3-none-any.whl", hash = "sha256:9d0319fe3ba553c9a77dc43a2d35b64a70c2b8809ad55a139a214803fde62bce"}, - {file = "weasyprint-63.1.tar.gz", hash = "sha256:cb424e63e8dd3f14195bfe5f203527646aa40a2f00ac819f9d39b8304cec0044"}, + {file = "weasyprint-64.0-py3-none-any.whl", hash = "sha256:2ef5539fc05a5d3b4fbee93c87fc20be93345c33895f280076c38071797eadef"}, + {file = "weasyprint-64.0.tar.gz", hash = "sha256:1ceb3ea6306db4a3d06df0eafae3a5a6e879c35c40091aa8ceb5bcb143e80b29"}, ] [package.dependencies] @@ -4167,7 +4209,7 @@ tinycss2 = ">=1.4.0" tinyhtml5 = ">=2.0.0b1" [package.extras] -doc = ["sphinx", "sphinx_rtd_theme"] +doc = ["furo", "sphinx"] test = ["pytest", "ruff"] [[package]] @@ -4475,4 +4517,4 @@ vtk = ["pyvista"] [metadata] lock-version = "2.0" python-versions = ">=3.9,<4.0" -content-hash = "2b31d5f2d8635459689746eb03eb9436a53dcfb9deeb19f6765149c500426759" +content-hash = "757e47c327dafd5598d08cc311e8ec5cb396db2d2f474d8ea982853de05ed736" diff --git a/pyproject.toml b/pyproject.toml index 5c5a931..041e1c7 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -31,16 +31,16 @@ nshm-toshi-client = {version = "^1.0.0", optional = true} pyproj = "^3.3" python = ">=3.9,<4.0" python-dateutil = "^2.8.2" -pytz = "2021.3" pyvista = {version = "^0.44.1", optional = true} geopandas = "^1.0.1" nzshm-common = "^0.8.1" -nzshm-model = "^0.10.6" # see https://github.com/orgs/python-poetry/discussions/7937 # urllib3 = "<2" pandera = {extras = ["mypy"], version = "^0.20.4"} +pytz = "^2025.1" +nzshm-model = {git = "https://github.com/GNS-Science/nzshm-model.git", rev = "pre-release"} @@ -63,7 +63,7 @@ optional = true [tool.poetry.group.doc.dependencies] mkdocs = "^1.6.1" -mkdocstrings = "^0.26.2" +mkdocstrings = {version = "^0.26.2", extras = ["python"]} mkdocs-autorefs = "^1.0.1" mkdocs-include-markdown-plugin = "^6.0.6" mkdocs-material = "^9.5.21" diff --git a/setup.cfg b/setup.cfg index 846b1f2..82f8506 100644 --- a/setup.cfg +++ b/setup.cfg @@ -35,6 +35,8 @@ exclude = .git, ignore_missing_imports = True # plugins = numpy.typing.mypy_plugin plugins = pandera.mypy +exclude = solvis/fault_system_solution_helper.py + [coverage:run] # exclude = */test_geometry_performance.py diff --git a/solvis/dochelper/__init__.py b/solvis/dochelper/__init__.py index 5f08aaa..13fddb3 100644 --- a/solvis/dochelper/__init__.py +++ b/solvis/dochelper/__init__.py @@ -1,6 +1,5 @@ """Package supporting dynamic dosstrings.""" -from .extension import DynamicDocstrings from .inherit_docstrings import inherit_docstrings -__all__ = ["DynamicDocstrings", "inherit_docstrings"] +__all__ = ["inherit_docstrings"] diff --git a/solvis/solution/fault_system_solution/fault_system_solution.py b/solvis/solution/fault_system_solution/fault_system_solution.py index 70de794..250f0ec 100644 --- a/solvis/solution/fault_system_solution/fault_system_solution.py +++ b/solvis/solution/fault_system_solution/fault_system_solution.py @@ -190,7 +190,7 @@ def get_branch_inversion_solution_id(branch: ModelLogicTreeBranch) -> str: This distinction may go away in future versions, simplifying this issue: https://github.com/GNS-Science/nzshm-model/issues/81 """ - if isinstance(branch, nm.logic_tree.source_logic_tree.version2.logic_tree.SourceBranch): + if isinstance(branch, nm.logic_tree.SourceBranch): # NZSHM Model 0.6: v2 branches take inversion ID from first InversionSource for source in branch.sources: if source.type == "inversion": diff --git a/test/geometry/test_geometry_distance.py b/test/geometry/test_geometry_distance.py index ef6b5c0..bd24660 100644 --- a/test/geometry/test_geometry_distance.py +++ b/test/geometry/test_geometry_distance.py @@ -5,27 +5,28 @@ import geopandas as gpd import numpy as np import pytest -import pyvista as pv from nzshm_common.location.location import location_by_id from pyproj import Transformer from pytest import approx from solvis import InversionSolution, geometry +pyvista = pytest.importorskip("pyvista") + TEST_FOLDER = pathlib.PurePath(os.path.realpath(__file__)).parent.parent class TestPyvistaDistances(unittest.TestCase): def test_basic_0_rake_90(self): - mesh0 = pv.PolyData([[0, 0, 0]], force_float=False) + mesh0 = pyvista.PolyData([[0, 0, 0]], force_float=False) p0 = [0, 1, 0] # 1st top-trace point p1 = [0, 2, 0] # 2nd top-trace point p2 = [1, 1, 10] # 1st botton trace point p3 = [1, 2, 10] # 2nd bottom trace point - mesh1 = pv.PolyData([p0, p1, p2, p3], force_float=False) + mesh1 = pyvista.PolyData([p0, p1, p2, p3], force_float=False) closest_cells, closest_points = mesh1.find_closest_cell(mesh0.points, return_closest_point=True) d_exact = np.linalg.norm(mesh0.points - closest_points, axis=1) @@ -36,14 +37,14 @@ def test_basic_0_rake_90(self): assert d_exact[0] == 1 def test_basic_1_further_at_depth(self): - mesh0 = pv.PolyData([0, 0, 0], force_float=False) + mesh0 = pyvista.PolyData([0, 0, 0], force_float=False) p0 = [0, 2, 0] # 1st top-trace point p1 = [0, 3, 0] # 2nd top-trace point p2 = [2, 2, 10] # 1st botton trace point p3 = [2, 3, 10] # 2nd bottom trace point - mesh1 = pv.PolyData([p0, p1, p2, p3], force_float=False) + mesh1 = pyvista.PolyData([p0, p1, p2, p3], force_float=False) closest_cells, closest_points = mesh1.find_closest_cell(mesh0.points, return_closest_point=True) d_exact = np.linalg.norm(mesh0.points - closest_points, axis=1) @@ -55,14 +56,14 @@ def test_basic_1_further_at_depth(self): assert d_exact[0] == 2.0 def test_basic_2_closer_at_depth(self): - mesh0 = pv.PolyData([0, 0, 0], force_float=False) + mesh0 = pyvista.PolyData([0, 0, 0], force_float=False) p0 = [10, 2, 0] # 1st top-trace point p1 = [10, 3, 0] # 2nd top-trace point p2 = [0, 2, 5] # 1st botton trace point p3 = [0, 3, 5] # 2nd bottom trace point - mesh1 = pv.PolyData([p0, p1, p2, p3], force_float=False) + mesh1 = pyvista.PolyData([p0, p1, p2, p3], force_float=False) closest_cells, closest_points = mesh1.find_closest_cell(mesh0.points, return_closest_point=True) d_exact = np.linalg.norm(mesh0.points - closest_points, axis=1) @@ -73,8 +74,8 @@ def test_basic_2_closer_at_depth(self): assert d_exact[0] > 5 def test_calc_distance_345_line(self): - origin = pv.PolyData([0, 0, 0], force_float=False) - surface = pv.PolyData([[3, 0, 4], [3, 1, 4]], force_float=False) + origin = pyvista.PolyData([0, 0, 0], force_float=False) + surface = pyvista.PolyData([[3, 0, 4], [3, 1, 4]], force_float=False) closest_cells, closest_points = surface.find_closest_cell(origin.points, return_closest_point=True) d_exact = np.linalg.norm(origin.points - closest_points, axis=1) @@ -84,8 +85,8 @@ def test_calc_distance_345_line(self): assert d_exact[0] == 5 def test_calc_distance_345_surface(self): - origin = pv.PolyData([0, 0, 0], force_float=False) - surface = pv.PolyData([[3, 0, 4], [15, 0, 4], [15, 1, 10], [3, 1, 10]], force_float=False) + origin = pyvista.PolyData([0, 0, 0], force_float=False) + surface = pyvista.PolyData([[3, 0, 4], [15, 0, 4], [15, 1, 10], [3, 1, 10]], force_float=False) closest_cells, closest_points = surface.find_closest_cell(origin.points, return_closest_point=True) d_exact = np.linalg.norm(origin.points - closest_points, axis=1)