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Connectivity visualization #82

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merged 26 commits into from
Jul 27, 2022

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Gauravu2
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@Gauravu2 Gauravu2 commented Jul 27, 2022

Directional and undirected connectivity Visualization using pyvis (interactive) and Graphviz

TODO:

  • Documentation and examples
  • Test cases

@Gauravu2 Gauravu2 added the enhancement New feature or request label Jul 27, 2022
@Gauravu2 Gauravu2 added this to the Version 0.2 milestone Jul 27, 2022
@Gauravu2 Gauravu2 requested a review from skim0119 July 27, 2022 02:47
@Gauravu2 Gauravu2 self-assigned this Jul 27, 2022
@Gauravu2 Gauravu2 changed the title [WIP] Connectivity visualization Connectivity visualization Jul 27, 2022
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codecov-commenter commented Jul 27, 2022

Codecov Report

Merging #82 (48b676f) into update-0.2.0 (4320dcf) will increase coverage by 2.33%.
The diff coverage is 33.33%.

@@               Coverage Diff                @@
##           update-0.2.0      #82      +/-   ##
================================================
+ Coverage         61.65%   63.98%   +2.33%     
================================================
  Files                35       36       +1     
  Lines              1098     1183      +85     
  Branches            123      138      +15     
================================================
+ Hits                677      757      +80     
- Misses              406      411       +5     
  Partials             15       15              
Flag Coverage Δ
unittests 63.98% <33.33%> (+2.33%) ⬆️

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
miv/statistics/spiketrain_statistics.py 87.75% <20.00%> (-7.81%) ⬇️
miv/visualization/connectivity.py 25.30% <25.30%> (ø)
miv/statistics/burst.py 80.48% <100.00%> (+14.63%) ⬆️
miv/statistics/pairwise_causality.py 100.00% <100.00%> (+64.28%) ⬆️
miv/visualization/__init__.py 100.00% <100.00%> (ø)
miv/visualization/causality.py 100.00% <100.00%> (+70.83%) ⬆️
miv/visualization/event.py 100.00% <0.00%> (+66.66%) ⬆️

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@skim0119 skim0119 merged commit c6ba492 into GazzolaLab:update-0.2.0 Jul 27, 2022
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3 participants