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release.yml
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name: PyAuto Release
on:
workflow_dispatch:
inputs:
minor_version:
description: 'Minor version to release'
required: true
default: '1'
skip_scripts:
description: 'Skip scripts'
required: false
default: 'false'
skip_notebooks:
description: 'Skip notebooks'
required: false
default: 'false'
jobs:
version_number:
runs-on: ubuntu-latest
outputs:
version_number: ${{ steps.version_number.outputs.version_number }}
steps:
- name: Compute version number
run: |
export DATE_FORMATTED=`date +"%Y.%-m.%-d"`
MINOR_VERSION="${{ github.event.inputs.minor_version }}"
VERSION="${DATE_FORMATTED}.${MINOR_VERSION:-${{ github.run_number }}}"
RUN_ATTEMPT="${{ github.run_attempt }}"
if [ "$RUN_ATTEMPT" -gt "1" ]
then
VERSION="$VERSION.$RUN_ATTEMPT"
fi
export VERSION
echo "::set-output name=version_number::${VERSION}"
id: version_number
release_test_pypi:
runs-on: ubuntu-latest
needs: version_number
env:
TWINE_REPOSITORY: testpypi
TWINE_USERNAME: __token__
TWINE_PASSWORD: ${{ secrets.TEST_PYPI }}
strategy:
matrix:
python-version: [3.11]
project:
- repository: rhayes777/PyAutoConf
ref: main
path: PyAutoConf
- repository: rhayes777/PyAutoFit
ref: main
path: PyAutoFit
- repository: Jammy2211/PyAutoArray
ref: main
path: PyAutoArray
- repository: Jammy2211/PyAutoGalaxy
ref: main
path: PyAutoGalaxy
- repository: Jammy2211/PyAutoLens
ref: main
path: PyAutoLens
- repository: Jammy2211/PyAutoCTI
ref: main
path: PyAutoCTI
steps:
- uses: actions/checkout@v2
with:
path: PyAutoBuild
- name: Checkout
uses: actions/checkout@v2
with:
repository: "${{ matrix.project.repository }}"
ref: "${{ matrix.project.ref }}"
path: "${{ matrix.project.path }}"
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Build
run: |
pushd "${{ matrix.project.path }}"
export VERSION="${{ needs.version_number.outputs.version_number }}"
sed -i "s/__version__ = [\.\"\'0-9]*/__version__ = \"$VERSION\"/g" */__init__.py
python3 -m pip install --upgrade build
python3 -m build
popd
- name: Upload to test PyPI
run: |
python3 -m pip install twine
pushd "${{ matrix.project.path }}"
python3 -m twine upload --repository-url https://test.pypi.org/legacy/ dist/*
popd
- name: Wait for packages to upload to Pypi
shell: bash {0} # So that we do not exit if a command gives a bad exit code
run: |
export PACKAGES=("autoconf" "autoarray" "autofit" "autogalaxy" "autolens" "autocti")
export VERSION="${{ needs.version_number.outputs.version_number }}"
for PACKAGE in ${PACKAGES[@]}; do
python3 -m pip install --index-url https://test.pypi.org/simple/ --extra-index-url https://pypi.org/simple $PACKAGE==$VERSION
test_condition=$?
cnt=0
while [[ $test_condition != "0" ]]; do
echo "Failed to find package, retrying in 10 seconds.."
sleep 10
((cnt=cnt+1))
[[ $cnt == "100" ]] && echo "Timed out, tried 100 times" && break
python3 -m pip install --index-url https://test.pypi.org/simple/ --extra-index-url https://pypi.org/simple $PACKAGE==$VERSION
test_condition=$?
done
done
- name: Tests
run: |
pushd "${{ matrix.project.path }}"
if test -f "optional_requirements.txt"
then
pip install -r requirements.txt
pip install -r optional_requirements.txt
fi
pip install matplotlib==3.6.0
pip install pytest
python3 -m pytest
find_scripts:
runs-on: ubuntu-latest
outputs:
matrix: ${{ steps.script_matrix.outputs.matrix }}
steps:
- name: Checkout AutoFit
uses: actions/checkout@v2
with:
repository: Jammy2211/autofit_workspace
path: autofit
- name: Checkout AutoGalaxy
uses: actions/checkout@v2
with:
repository: Jammy2211/autogalaxy_workspace
path: autogalaxy
- name: Checkout AutoLens
uses: actions/checkout@v2
with:
repository: Jammy2211/autolens_workspace
path: autolens
- name: Checkout AutoCTI
uses: actions/checkout@v2
with:
repository: Jammy2211/autocti_workspace
path: autocti
- name: Checkout AutoFit Test
uses: actions/checkout@v2
with:
repository: Jammy2211/autofit_workspace_test
path: autofit_test
- name: Checkout AutoLens Test
uses: actions/checkout@v2
with:
repository: Jammy2211/autolens_workspace_test
path: autolens_test
- uses: actions/checkout@v2
with:
path: PyAutoBuild
- name: Make script matrix
id: script_matrix
run: |
matrix="$(./PyAutoBuild/autobuild/script_matrix.py autofit autogalaxy autolens autocti autofit_test autolens_test)"
echo "::set-output name=matrix::$matrix"
run_scripts:
runs-on: ubuntu-latest
needs:
- release_test_pypi
- version_number
- find_scripts
strategy:
fail-fast: false
matrix:
python-version: [3.11]
project:
${{ fromJSON(needs.find_scripts.outputs.matrix) }}
steps:
- name: Configure
if: "${{ github.event.inputs.skip_scripts != 'true' }}"
id: configure
run: |
if [ ${{ matrix.project.name }} == "autofit" ]
then
echo "::set-output name=repository::rhayes777/PyAutoFit"
echo "::set-output name=workspace_repository::Jammy2211/autofit_workspace"
echo "::set-output name=project::autofit"
elif [ ${{ matrix.project.name }} == "autogalaxy" ]
then
echo "::set-output name=repository::Jammy2211/PyAutoGalaxy"
echo "::set-output name=workspace_repository::Jammy2211/autogalaxy_workspace"
echo "::set-output name=project::autogalaxy"
elif [ ${{ matrix.project.name }} == "autolens" ]
then
echo "::set-output name=repository::Jammy2211/PyAutoLens"
echo "::set-output name=workspace_repository::Jammy2211/autolens_workspace"
echo "::set-output name=project::autolens"
elif [ ${{ matrix.project.name }} == "autocti" ]
then
echo "::set-output name=repository::Jammy2211/PyAutoCTI"
echo "::set-output name=workspace_repository::Jammy2211/autocti_workspace"
echo "::set-output name=project::autocti"
elif [ ${{ matrix.project.name }} == "autofit_test" ]
then
echo "::set-output name=repository::rhayes777/PyAutoFit"
echo "::set-output name=workspace_repository::Jammy2211/autofit_workspace_test"
echo "::set-output name=project::autofit"
else
echo "::set-output name=repository::Jammy2211/PyAutoLens"
echo "::set-output name=workspace_repository::Jammy2211/autolens_workspace_test"
echo "::set-output name=project::autolens"
fi
- uses: actions/checkout@v2
if: "${{ github.event.inputs.skip_scripts != 'true' }}"
with:
path: PyAutoBuild
- name: Checkout project
if: "${{ github.event.inputs.skip_scripts != 'true' }}"
uses: actions/checkout@v2
with:
repository: "${{ steps.configure.outputs.repository }}"
path: project
- name: Checkout workspace
if: "${{ github.event.inputs.skip_scripts != 'true' }}"
uses: actions/checkout@v2
with:
repository: ${{ steps.configure.outputs.workspace_repository }}
ref: main
path: workspace
- name: Set up Python ${{ matrix.python-version }}
if: "${{ github.event.inputs.skip_scripts != 'true' }}"
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Install optional requirements
if: "${{ github.event.inputs.skip_scripts != 'true' }}"
run: |
if [ -f "project/optional_requirements.txt" ]
then
echo "Installing optional requirements"
python3 -m pip install -r "project/requirements.txt"
python3 -m pip install -r "project/optional_requirements.txt"
pip uninstall -y jax
pip uninstall -y jaxlib
pip install matplotlib==3.6.0
fi
- name: Install project
if: "${{ github.event.inputs.skip_scripts != 'true' }}"
run: |
python3 -m pip install --index-url https://test.pypi.org/simple/ --extra-index-url https://pypi.org/simple "${{ steps.configure.outputs.project }}==${{ needs.version_number.outputs.version_number }}"
- name: Run Python scripts
if: "${{ github.event.inputs.skip_scripts != 'true' }}"
run: |
export PYTHONPATH=$PYTHONPATH:$(pwd)/PyAutoBuild
export PATH=$PATH:$(pwd)/PyAutoBuild/autobuild
AUTOBUILD_PATH="$(pwd)/PyAutoBuild/autobuild"
if [[ ${{ matrix.project.name }} == *_test ]]
then
export PYAUTOFIT_TEST_MODE=0
else
export PYAUTOFIT_TEST_MODE=1
fi
pushd workspace
python3 "$AUTOBUILD_PATH/run_python.py" ${{ matrix.project.name }} "scripts/${{ matrix.project.directory }}"
run_notebooks:
runs-on: ubuntu-latest
needs:
- release_test_pypi
- version_number
- find_scripts
strategy:
fail-fast: false
matrix:
python-version: [3.11]
project:
${{ fromJSON(needs.find_scripts.outputs.matrix) }}
steps:
- name: Configure
if: "${{ github.event.inputs.skip_notebooks != 'true' }}"
id: configure
run: |
if [ ${{ matrix.project.name }} == "autofit" ]
then
echo "::set-output name=repository::rhayes777/PyAutoFit"
echo "::set-output name=workspace_repository::Jammy2211/autofit_workspace"
echo "::set-output name=project::autofit"
elif [ ${{ matrix.project.name }} == "autogalaxy" ]
then
echo "::set-output name=repository::Jammy2211/PyAutoGalaxy"
echo "::set-output name=workspace_repository::Jammy2211/autogalaxy_workspace"
echo "::set-output name=project::autogalaxy"
elif [ ${{ matrix.project.name }} == "autolens" ]
then
echo "::set-output name=repository::Jammy2211/PyAutoLens"
echo "::set-output name=workspace_repository::Jammy2211/autolens_workspace"
echo "::set-output name=project::autolens"
else
echo "::set-output name=repository::Jammy2211/PyAutoCTI"
echo "::set-output name=workspace_repository::Jammy2211/autocti_workspace"
echo "::set-output name=project::autocti"
fi
- uses: actions/checkout@v2
if: "${{ github.event.inputs.skip_notebooks != 'true' }}"
with:
path: PyAutoBuild
- name: Checkout project
if: "${{ github.event.inputs.skip_notebooks != 'true' }}"
uses: actions/checkout@v2
with:
repository: "${{ steps.configure.outputs.repository }}"
path: project
- name: Checkout workspace
if: "${{ github.event.inputs.skip_notebooks != 'true' }}"
uses: actions/checkout@v2
with:
repository: ${{ steps.configure.outputs.workspace_repository }}
ref: main
path: workspace
- name: Set up Python ${{ matrix.python-version }}
if: "${{ github.event.inputs.skip_notebooks != 'true' }}"
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Install optional requirements
if: "${{ github.event.inputs.skip_notebooks != 'true' }}"
run: |
if [ -f "project/optional_requirements.txt" ]
then
echo "Installing optional requirements"
python3 -m pip install -r "project/requirements.txt"
python3 -m pip install -r "project/optional_requirements.txt"
pip uninstall -y jax
pip uninstall -y jaxlib
pip install matplotlib==3.6.0
fi
- name: Install project
if: "${{ github.event.inputs.skip_notebooks != 'true' }}"
run: |
python3 -m pip install --index-url https://test.pypi.org/simple/ --extra-index-url https://pypi.org/simple "${{ steps.configure.outputs.project }}==${{ needs.version_number.outputs.version_number }}"
- name: Install Jupyter dependency
if: "${{ github.event.inputs.skip_notebooks != 'true' }}"
run: |
python3 -m pip install jupyter ipynb-py-convert
- name: Generate jupyter notebooks
if: "${{ github.event.inputs.skip_notebooks != 'true' }}"
run: |
export PYTHONPATH=$PYTHONPATH:$(pwd)/PyAutoBuild
AUTOBUILD_PATH="$(pwd)/PyAutoBuild/autobuild"
pushd "workspace"
python3 "$AUTOBUILD_PATH/generate.py" ${{ matrix.project.name }}
- name: Run jupyter notebooks
if: "${{ github.event.inputs.skip_notebooks != 'true' }}"
run: |
if [[ ${{ matrix.project.name }} == *_test ]]
then
export PYAUTOFIT_TEST_MODE=0
else
export PYAUTOFIT_TEST_MODE=1
fi
export PYTHONPATH=$PYTHONPATH:$(pwd)/PyAutoBuild
AUTOBUILD_PATH="$(pwd)/PyAutoBuild/autobuild"
pushd workspace
python3 "$AUTOBUILD_PATH/run.py" ${{ matrix.project.name }} "notebooks/${{ matrix.project.directory }}"
release:
runs-on: ubuntu-latest
env:
TWINE_REPOSITORY: pypi
TWINE_USERNAME: __token__
TWINE_PASSWORD: ${{ secrets.PYPI }}
needs:
- run_scripts
- run_notebooks
- release_test_pypi
- version_number
strategy:
matrix:
project:
- repository: rhayes777/PyAutoConf
ref: main
path: PyAutoConf
pat: PAT_RICH
- repository: rhayes777/PyAutoFit
ref: main
path: PyAutoFit
pat: PAT_RICH
- repository: Jammy2211/PyAutoArray
ref: main
path: PyAutoArray
pat: PAT_JAMES
- repository: Jammy2211/PyAutoGalaxy
ref: main
path: PyAutoGalaxy
pat: PAT_JAMES
- repository: Jammy2211/PyAutoLens
ref: main
path: PyAutoLens
pat: PAT_JAMES
- repository: Jammy2211/PyAutoCTI
ref: main
path: PyAutoCTI
pat: PAT_JAMES
steps:
- uses: actions/checkout@v2
with:
path: PyAutoBuild
- name: Checkout
run: |
git clone -b "${{ matrix.project.ref }}" "https://[email protected]/${{ matrix.project.repository }}.git" "${{ matrix.project.path }}"
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Configure Git
run: |
git config --global user.email "[email protected]"
git config --global user.name "GitHub Actions bot"
- name: Update version
run: |
pushd "${{ matrix.project.path }}"
VERSION="${{ needs.version_number.outputs.version_number }}"
sed -i "s/__version__ = [\.\"\'0-9]*/__version__ = \"$VERSION\"/g" */__init__.py
git commit "-am 'Updated version in __init__ to $VERSION"
- name: Tag
run: |
pushd "${{ matrix.project.path }}"
VERSION="${{ needs.version_number.outputs.version_number }}"
git tag -m "Release $VERSION" -a "$VERSION"
PAT="${{ secrets[matrix.project.pat] }}"
git remote set-url --push origin "https://[email protected]/${{ matrix.project.repository }}.git"
git push --tags
- name: Build
run: |
pushd "${{ matrix.project.path }}"
export VERSION="${{ needs.version_number.outputs.version_number }}"
python3 -m pip install --upgrade build
python3 -m build
- name: Upload to PyPI
run: |
python3 -m pip install twine
pushd "${{ matrix.project.path }}"
python3 -m twine upload dist/*
release_workspaces:
runs-on: ubuntu-latest
env:
TWINE_REPOSITORY: pypi
TWINE_USERNAME: __token__
TWINE_PASSWORD: ${{ secrets.PYPI }}
PAT: ${{ secrets.PAT_JAMES }}
needs:
- run_scripts
- run_notebooks
- release_test_pypi
- version_number
strategy:
matrix:
python-version: [3.11]
workspace:
- repository: Jammy2211/autofit_workspace
name: autofit -
- repository: Jammy2211/autogalaxy_workspace
name: autogalaxy
- repository: Jammy2211/autolens_workspace
name: autolens
- repository: Jammy2211/autocti_workspace
name: autocti
steps:
- uses: actions/checkout@v2
with:
path: PyAutoBuild
- name: Checkout
run: |
git clone -b main "https://[email protected]/${{ matrix.workspace.repository }}.git" workspace
- name: Configure Git
run: |
git config --global user.email "[email protected]"
git config --global user.name "GitHub Actions bot"
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Install Jupyter dependency
run: |
pip install jupyter ipynb-py-convert PyYAML
- name: Update jupyter notebooks
run: |
export PYTHONPATH=$PYTHONPATH:$(pwd)/PyAutoBuild
AUTOBUILD_PATH="$(pwd)/PyAutoBuild/autobuild"
pushd workspace
python3 "$AUTOBUILD_PATH/generate.py" ${{ matrix.workspace.name }}
git add *.ipynb
git commit -m "Updated notebooks" || true
- name: Release
run: |
cd workspace
git checkout release
git merge main
VERSION="${{ needs.version_number.outputs.version_number }}"
git tag -m "Release $VERSION" -a "$VERSION"
git push
git push --tags