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1.5.0-DEV-86ee57cdd7.log
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Julia Version 1.5.0-DEV.689
Commit 86ee57cdd7 (2020-04-25 20:17 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed DataValueInterfaces ────────── v1.0.0
Installed SortingAlgorithms ──────────── v0.3.1
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed Rmath ──────────────────────── v0.6.1
Installed PyRhodium ──────────────────── v0.1.0
Installed SpecialFunctions ───────────── v0.10.0
Installed PyCall ─────────────────────── v1.91.4
Installed JSON ───────────────────────── v0.21.0
Installed Conda ──────────────────────── v1.4.1
Installed CompilerSupportLibraries_jll ─ v0.3.3+0
Installed InvertedIndices ────────────── v1.0.0
Installed Missings ───────────────────── v0.4.3
Installed OpenBLAS_jll ───────────────── v0.3.9+2
Installed Parsers ────────────────────── v1.0.2
Installed Tables ─────────────────────── v1.0.4
Installed DataAPI ────────────────────── v1.2.0
Installed Requires ───────────────────── v1.0.1
Installed TableTraitsUtils ───────────── v1.0.1
Installed PDMats ─────────────────────── v0.9.12
Installed Distributions ──────────────── v0.23.2
Installed IterableTables ─────────────── v1.0.0
Installed CategoricalArrays ──────────── v0.7.7
Installed DataStructures ─────────────── v0.17.13
Installed StatsBase ──────────────────── v0.33.0
Installed Rmath_jll ──────────────────── v0.2.2+0
Installed StatsFuns ──────────────────── v0.9.4
Installed PooledArrays ───────────────── v0.5.3
Installed MacroTools ─────────────────── v0.5.5
Installed TableTraits ────────────────── v1.0.0
Installed Arpack ─────────────────────── v0.4.0
Installed OrderedCollections ─────────── v1.1.0
Installed DataValues ─────────────────── v0.4.13
Installed Compat ─────────────────────── v3.8.0
Installed Reexport ───────────────────── v0.2.0
Installed IteratorInterfaceExtensions ── v1.0.0
Installed FillArrays ─────────────────── v0.8.7
Installed PyPlot ─────────────────────── v2.9.0
Installed LaTeXStrings ───────────────── v1.1.0
Installed VersionParsing ─────────────── v1.2.0
Installed ColorTypes ─────────────────── v0.10.2
Installed QuadGK ─────────────────────── v2.3.1
Installed Arpack_jll ─────────────────── v3.5.0+3
Installed DataFrames ─────────────────── v0.20.2
Installed FixedPointNumbers ──────────── v0.8.0
Installed Colors ─────────────────────── v0.12.0
Updating `~/.julia/environments/v1.5/Project.toml`
[e525b322] + PyRhodium v0.1.0
Updating `~/.julia/environments/v1.5/Manifest.toml`
[7d9fca2a] + Arpack v0.4.0
[68821587] + Arpack_jll v3.5.0+3
[324d7699] + CategoricalArrays v0.7.7
[3da002f7] + ColorTypes v0.10.2
[5ae59095] + Colors v0.12.0
[34da2185] + Compat v3.8.0
[e66e0078] + CompilerSupportLibraries_jll v0.3.3+0
[8f4d0f93] + Conda v1.4.1
[9a962f9c] + DataAPI v1.2.0
[a93c6f00] + DataFrames v0.20.2
[864edb3b] + DataStructures v0.17.13
[e2d170a0] + DataValueInterfaces v1.0.0
[e7dc6d0d] + DataValues v0.4.13
[31c24e10] + Distributions v0.23.2
[1a297f60] + FillArrays v0.8.7
[53c48c17] + FixedPointNumbers v0.8.0
[41ab1584] + InvertedIndices v1.0.0
[1c8ee90f] + IterableTables v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[b964fa9f] + LaTeXStrings v1.1.0
[1914dd2f] + MacroTools v0.5.5
[e1d29d7a] + Missings v0.4.3
[4536629a] + OpenBLAS_jll v0.3.9+2
[efe28fd5] + OpenSpecFun_jll v0.5.3+3
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.12
[69de0a69] + Parsers v1.0.2
[2dfb63ee] + PooledArrays v0.5.3
[438e738f] + PyCall v1.91.4
[d330b81b] + PyPlot v2.9.0
[e525b322] + PyRhodium v0.1.0
[1fd47b50] + QuadGK v2.3.1
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.0.1
[79098fc4] + Rmath v0.6.1
[f50d1b31] + Rmath_jll v0.2.2+0
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.10.0
[2913bbd2] + StatsBase v0.33.0
[4c63d2b9] + StatsFuns v0.9.4
[3783bdb8] + TableTraits v1.0.0
[382cd787] + TableTraitsUtils v1.0.1
[bd369af6] + Tables v1.0.4
[81def892] + VersionParsing v1.2.0
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Conda ────→ `~/.julia/packages/Conda/3rPhK/deps/build.log`
Building PyCall ───→ `~/.julia/packages/PyCall/zqDXB/deps/build.log`
Building PyRhodium → `~/.julia/packages/PyRhodium/aU37D/deps/build.log`
Testing PyRhodium
Status `/tmp/jl_wxMFHC/Project.toml`
[8f4d0f93] Conda v1.4.1
[a93c6f00] DataFrames v0.20.2
[864edb3b] DataStructures v0.17.13
[31c24e10] Distributions v0.23.2
[1c8ee90f] IterableTables v1.0.0
[438e738f] PyCall v1.91.4
[d330b81b] PyPlot v2.9.0
[e525b322] PyRhodium v0.1.0
[f2b01f46] Roots v1.0.1
[9a3f8284] Random
[8dfed614] Test
Status `/tmp/jl_wxMFHC/Manifest.toml`
[7d9fca2a] Arpack v0.4.0
[68821587] Arpack_jll v3.5.0+3
[324d7699] CategoricalArrays v0.7.7
[3da002f7] ColorTypes v0.10.2
[5ae59095] Colors v0.12.0
[34da2185] Compat v3.8.0
[e66e0078] CompilerSupportLibraries_jll v0.3.3+0
[8f4d0f93] Conda v1.4.1
[9a962f9c] DataAPI v1.2.0
[a93c6f00] DataFrames v0.20.2
[864edb3b] DataStructures v0.17.13
[e2d170a0] DataValueInterfaces v1.0.0
[e7dc6d0d] DataValues v0.4.13
[31c24e10] Distributions v0.23.2
[1a297f60] FillArrays v0.8.7
[53c48c17] FixedPointNumbers v0.8.0
[41ab1584] InvertedIndices v1.0.0
[1c8ee90f] IterableTables v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[b964fa9f] LaTeXStrings v1.1.0
[1914dd2f] MacroTools v0.5.5
[e1d29d7a] Missings v0.4.3
[4536629a] OpenBLAS_jll v0.3.9+2
[efe28fd5] OpenSpecFun_jll v0.5.3+3
[bac558e1] OrderedCollections v1.1.0
[90014a1f] PDMats v0.9.12
[69de0a69] Parsers v1.0.2
[2dfb63ee] PooledArrays v0.5.3
[438e738f] PyCall v1.91.4
[d330b81b] PyPlot v2.9.0
[e525b322] PyRhodium v0.1.0
[1fd47b50] QuadGK v2.3.1
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.0.1
[79098fc4] Rmath v0.6.1
[f50d1b31] Rmath_jll v0.2.2+0
[f2b01f46] Roots v1.0.1
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.10.0
[2913bbd2] StatsBase v0.33.0
[4c63d2b9] StatsFuns v0.9.4
[3783bdb8] TableTraits v1.0.0
[382cd787] TableTraitsUtils v1.0.1
[bd369af6] Tables v1.0.4
[81def892] VersionParsing v1.2.0
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
ERROR: LoadError: InitError: PyError (PyImport_ImportModule
The Python package rhodium could not be found by pyimport. Usually this means
that you did not install rhodium in the Python version being used by PyCall.
PyCall is currently configured to use the Python version at:
/usr/bin/python3
and you should use whatever mechanism you usually use (apt-get, pip, conda,
etcetera) to install the Python package containing the rhodium module.
One alternative is to re-configure PyCall to use a different Python
version on your system: set ENV["PYTHON"] to the path/name of the python
executable you want to use, run Pkg.build("PyCall"), and re-launch Julia.
Another alternative is to configure PyCall to use a Julia-specific Python
distribution via the Conda.jl package (which installs a private Anaconda
Python distribution), which has the advantage that packages can be installed
and kept up-to-date via Julia. As explained in the PyCall documentation,
set ENV["PYTHON"]="", run Pkg.build("PyCall"), and re-launch Julia. Then,
To install the rhodium module, you can use `pyimport_conda("rhodium", PKG)`,
where PKG is the Anaconda package the contains the module rhodium,
or alternatively you can use the Conda package directly (via
`using Conda` followed by `Conda.add` etcetera).
) <class 'ModuleNotFoundError'>
ModuleNotFoundError("No module named 'rhodium'",)
Stacktrace:
[1] pyimport(::String) at /home/pkgeval/.julia/packages/PyCall/zqDXB/src/PyCall.jl:536
[2] __init__() at /home/pkgeval/.julia/packages/PyRhodium/aU37D/src/PyRhodium.jl:26
[3] _include_from_serialized(::String, ::Array{Any,1}) at ./loading.jl:697
[4] _require_from_serialized(::String) at ./loading.jl:748
[5] _require(::Base.PkgId) at ./loading.jl:1039
[6] require(::Base.PkgId) at ./loading.jl:927
[7] require(::Module, ::Symbol) at ./loading.jl:922
[8] include(::String) at ./client.jl:457
[9] top-level scope at none:6
during initialization of module PyRhodium
in expression starting at /home/pkgeval/.julia/packages/PyRhodium/aU37D/test/runtests.jl:1
ERROR: Package PyRhodium errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Types.jl:52
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1515
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:316
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:303
[5] #test#68 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:297 [inlined]
[6] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:297 [inlined]
[7] #test#67 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:296 [inlined]
[8] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:296 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:295
[10] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:295
[11] top-level scope at none:16