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@chenv3 chenv3 released this 21 Nov 16:49
· 66 commits to main since this release
v1.1.0
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Learn about vigilant mode.

What's Changed

  • Dev - GEX QC and Aggregate, BAM, and Clean-Up by @chenv3 in #2
    • GEX Initial QC with Seurat
    • GEX Initial QC Sample Report
    • Turn off automatic BAM creation
      • Add create-bam flag that can be used to create BAM file
      • Applies to:
        • GEX
        • CITE
        • MULTI
    • Add GEX aggregate flag
      • Choose between mapped and none for read depth normalization
    • Automatic clean-up of intermediate Cell Ranger folder for all pipelines
    • Edit summary report script to not check for intermediate folder and to keep 10x column header order for additional columns

Full Changelog: v1.0.0...v1.1.0

Contributors

chenv3
Assets 2
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