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Figure2B.parameters.nml
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<?xml version="1.0" encoding="UTF-8"?>
<neuroml xmlns="http://www.neuroml.org/schema/neuroml2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.neuroml.org/schema/neuroml2 https://raw.githubusercontent.com/NeuroML/NeuroML2/development/Schemas/NeuroML2/NeuroML_v2beta4.xsd" id="CA3pyramidalPR">
<twoCompartmentCell id="pr2B">
<notes>Parameters for Figure 2B of Pinsky Rinsel '94 model.</notes>
<morphology id="morphology">
<segment id="0" name="soma">
<proximal x="0.0" y="0.0" z="0.0" diameter="3.134"/>
<distal x="0.0" y="100.0" z="0.0" diameter="3.134"/>
</segment>
<segment id="1" name="dend">
<parent segment="0"/>
<proximal x="0.0" y="100.0" z="0.0" diameter="3.134"/>
<distal x="0.0" y="200.0" z="0.0" diameter="3.134"/>
</segment>
<segmentGroup id="soma" neuroLexId="sao864921383">
<member segment="0"/>
</segmentGroup>
<segmentGroup id="dend" neuroLexId="sao864921383">
<member segment="1"/>
</segmentGroup>
<segmentGroup id="all">
<include segmentGroup="soma"/>
<include segmentGroup="dend"/>
</segmentGroup>
<segmentGroup id="soma_group" neuroLexId="GO:0043025">
<include segmentGroup="soma"/>
</segmentGroup>
<segmentGroup id="dendrite_group" neuroLexId="GO:0030425">
<include segmentGroup="dend"/>
</segmentGroup>
</morphology>
<channelDensitiesSoma id="channelDensitiesSoma" couplingStrength="2.1" iDensityInjection="-0.5 uA_per_cm2">
<channelDensity id="somaLeakChannels" ionChannel="somaLeak" condDensity="0.1 mS_per_cm2" erev="-60 mV"
segmentGroup="soma_group" ion="non-specific" />
<channelDensity id="somaNaChannels" ionChannel="Na" condDensity="30.0 mS_per_cm2" erev="60 mV"
segmentGroup="soma_group" ion="na"/>
<channelDensity id="somaKdrChannels" ionChannel="Kdr" condDensity="15.0 mS_per_cm2" erev="-75 mV"
segmentGroup="soma_group" ion="k"/>
</channelDensitiesSoma>
<channelDensitiesDendrite id="channelDensitiesDendrite" iDensityInjection="2.49 uA_per_cm2" initialQ="0">
<channelDensity id="dendriteLeakChannels" ionChannel="dendriteLeak" condDensity="0.1 mS_per_cm2"
erev="-60 mV" segmentGroup="dendrite_group" ion="non-specific" />
<channelDensity id="CadChannels" ionChannel="Cad" condDensity="10 mS_per_cm2" erev="80 mV"
segmentGroup="dendrite_group" ion="ca" />
<channelDensity id="KahpChannels" ionChannel="Kahp" condDensity="0.8 mS_per_cm2" erev="-75 mV"
segmentGroup="dendrite_group" ion="k" />
<channelDensity id="KCChannels" ionChannel="KC" condDensity="15 mS_per_cm2" erev="-75 mV"
segmentGroup="dendrite_group" ion="k" />
<channelDensity id="NmdaChannels" ionChannel="Nmda" condDensity="0 mS_per_cm2" erev="60 mV"
segmentGroup="dendrite_group" ion="non-specific" />
<channelDensity id="AmpaChannels" ionChannel="Ampa" condDensity="0 mS_per_cm2" erev="60 mV"
segmentGroup="dendrite_group" ion="non-specific" />
</channelDensitiesDendrite>
<biophysicalProperties>
<membraneProperties>
<spikeThresh value="0 mV"/>
<specificCapacitance value="3.0 uF_per_cm2"/>
<initMembPotential value="-60.0 mV"/>
</membraneProperties>
<intracellularProperties />
</biophysicalProperties>
</twoCompartmentCell>
</neuroml>