Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Extract subtrees from a time slice #5

Open
Caetanods opened this issue Jun 11, 2014 · 1 comment
Open

Extract subtrees from a time slice #5

Caetanods opened this issue Jun 11, 2014 · 1 comment

Comments

@Caetanods
Copy link

Most of the studies are focused in a particular clade that corresponds to a taxonomic group and share recognizable characteristics (traits). Examples are families, genera and etc. However, would be interesting to be able to extract subtrees from a time slice of the Tree of Life dated phylogeny. The user could give a set of time slices (e.g., millions of years in the past) and a group (e.g., Angiosperms, Vertebrates, Mammalia) and the output would be all subtrees within that group from the date given to the present pruned by that time slice. With this tool researchers could elect phylogenetic groups that share the same evolutionary time (a time-wise phylogenetic unit), investigate evolutionary trends common to several groups and etc.

@chinchliff
Copy link
Member

This would be awesome. The biggest challenge is that time information is scarce. We might need to figure out a way to bring in more time information from other sources before we are able to make much progress.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

3 participants