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DESCRIPTION
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Package: VeloSim
Title: Simulate Single Cell RNA Sequencing Data with RNA velocity (One Line, Title Case)
Version: 0.0.0.9000
Authors@R:
c(person(given = "Ziqi",
family = "Zhang",
role = c("aut", "cre"),
email = "[email protected]",
comment = c(ORCID = "0000-0002-8198-0260")),
person(given = "Xiuwei",
family = "Zhang",
role = "aut",
email = "[email protected]",
comment = c(ORCID = "0000-0002-1713-772X")))
Description: This package simulates single cell RNA sequencing data during cell developmental process, the simulation includes unspliced RNA count, spliced RNA count, RNA velocity and cell developmental pseudo-time. The simulation can be used to benchmark computational methods including trajectory inference and RNA velocity inference.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.1
Depends:
R (>= 3.5.0),
plyr,
ggplot2,
umap
Suggests:
knitr,
rmarkdown
VignetteBuilder: knitr