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changes_log.txt
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Changes:
- Added the documentation files, the license and a readme.
- No changes on any schema.
Changes in revision 71:
- fixed unique tar @Id in data
Changes in revision 70:
- modified sample description
- unique cycles in adp
- unique temp in mdp
- unique tarId in data
Changes in revision 69:
- dataType excl and exclExp joined together
- Removed none from measureType
Changes in revision 68:
- Fixed a typo - lable to label
- Made all dataCollectionSoftwareType non-optional
Changes in revision 67:
- Fixed a typo - only affects schema
Changes in revision 66:
- Finished renaming thermalCyclingCondition to thermalCyclingConditions
Changes in revision 65:
- Changed detectionLimit in target description (unit)
Changes in revision 64:
- Introduced detectionLimit in target (reviewers request)
Changes in revision 63:
- unique Experimenter IDs
Changes in revision 62:
- in rdml thermalCyclingCondition renamed to thermalCyclingConditions
Changes in revision 61:
- in run thermalCyclingConditionsId renamed to thermalCyclingConditions and ID is attribute
- in cdnaSynthesisMethod thermalCyclingConditionsId renamed to thermalCyclingConditions and ID is attribute
- in data tarId renamed to tar and ID is attribute
- in react sampleId renamed to sample and ID is attribute
- in thermalCyclingCondition experimenterId renamed to experimenter and ID is attribute
- in run experimenterId renamed to experimenter and ID is attribute
- documentReferencesType renamed to idReferencesType - should not change anything
Changes in revision 58:
- documentID are changed to document with attribute ID
- quantityType Unit is changed to unit
Changes in revision 51:
- quantity and unit is one element
- document is now all
Changes in revision 49:
- fixed some typos
Changes in revision 48:
- added a unit for quantity
- fixed some typos
Changes in revision 46:
- changed all IDs and RDML version to attributes
- made some IDs unique
Changes in revision 45:
- made xRefs unique (Big thanks to Daniel)
Changes in revision 44:
- Fixed typos in annotations (Thanks to Daniel)
- Modified some annotations
Changes in revision 43:
- added Endpoint in data
- ampEff in data is deleted
- well is renamed to react (for reaction)
- added explanation to the elements which are not crystal clear
- added quantity in sample to allow absolute quantification of copies
- deleted templateIsolationMethod
- pcrFormat is not optional any more
- in pcrFormat "undescribed format" is renamed to "free format"
Changes in revision 42:
- organism in target removed
- rtPrimerDbId in target removed
- annotation in experiment removed
- Annotation in run removed, subelements are now in run
- backgroundDeterminationMethod, cqDetectionMethod and
thermalCyclingConditionsId are now in run
Changes in revision 41:
- cqDetectionMethod has additional type "other" (Jans tip)
- primingMethod has additional type "oligo-dt and random" (Jans tip)
- in sample templateQuantity and templateQuality were split up in
two fields, one for RNA the other for DNA. (Jans tip)
Changes in revision 40:
- samples also have a xRef now.
- changed order: in teargetType xRef moved behind documentation.
- all elements in cdnaSynthesisMethodType are optional for increased flexibility.
- dnaseTreatment was moved from sample to cdnaSynthesisMethodType because a
DNAse treatment makes only sense in a cDNA synthesis context.
- in dataCollectionSoftwareType thermalCyclingConditionsId can occur only once.
- cdnaSynthesisMethodType has a thermalCyclingConditionsId for cDNA synthesis.
- added an documentationID in annotationType
Changes in revision 38:
- all IDs have to be at least 1 letter long (Thanks Daniel!)
- changed order in sampleType to have description and documentation following ID
- changed order in targetType to have description and documentation following ID
- added documentationID in targetType, experimentType, sampleType,
thermalCyclingConditionType to link to one or unlimited documentationType.
- added documentationType in rdml (similar to samples and targets)
- rdmlIdType: added optional element MD5hash
Changes in revision 37:
- added rdml: namespace everywhere
- fixed error of sampleIdKeyRef
- fixed errors of keyRef
Changes in revision 36:
- sequenceType: string has now IUPAC case matching
- targetType: also has a description string now
- oligoType: The sequence is not optional any more
- sequencesType: Forward primer, reverse primer and amplicon are optional
This allows to specify any combination of primers and amplicons.
- experimentType: name element renamed to description.
- thermalCyclingConditionType: name element renamed to description.
Last revision 35 was from 23/6/08