0.5.1

Unicycler container

Main tools:

• Unicycler

Other tools:

• spades version 4.1.0
• racon version 1.5.0
• blast version 2.16.0

Unicycler is a hybrid assembler that takes reads assembled with spades and ties them together with long reads.

Example Usage

unicycler -1 short_reads_1.fastq.gz -2 short_reads_2.fastq.gz -l long_reads.fastq.gz -o output_dir

Better documentation can be found at https://github.com/rrwick/Unicycler