diff --git a/subworkflows/local/report.nf b/subworkflows/local/report.nf index 7a4e4d9..24dbd5a 100644 --- a/subworkflows/local/report.nf +++ b/subworkflows/local/report.nf @@ -39,5 +39,6 @@ workflow REPORT { SUMMARY(for_summary.mix(ch_names).mix(MULTIQC.out.data_folder).collect()) emit: - SUMMARY.out.extended_tsv + summary = SUMMARY.out.extended_tsv + versions = ch_versions } \ No newline at end of file diff --git a/subworkflows/local/test.nf b/subworkflows/local/test.nf index 994f22a..3011761 100644 --- a/subworkflows/local/test.nf +++ b/subworkflows/local/test.nf @@ -10,7 +10,7 @@ workflow TEST { ch_versions = Channel.empty() if ( ! params.sra_accessions.isEmpty() || ! params.genome_accessions.isEmpty() ) { - DOWNLOAD_FASTQ(ch_sra_accessions) + DOWNLOAD_FASTQ(ch_sra_accessions.filter()) ch_versions = ch_versions.mix(DOWNLOAD_FASTQ.out.versions.first()) DOWNLOAD_FASTQ.out.fastq