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Add connectivity label to Individuals that have connectivity data #16
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Queries we need to drive:
Maybe separate labels on Inds are best if we don't know whether region and neuron connectivity will always go together. => neuron_neuron_connectivity (inds and classes) |
Probably need three labels even though they may overlap as will ensure actual results improving user experience considerably. |
Maybe two would be OK as we can distinguish Individuals from Classes separately? |
Example SPARQL: PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
CONSTRUCT {
?x <http://n2o.neo/property/nodeLabel> "neuron_neuron_connectivity" .
}
WHERE {
?x <http://purl.obolibrary.org/obo/RO_0002120> ?y . # synapsed_to
?x rdf:type owl:NamedIndividual .
} PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
CONSTRUCT {
?x <http://n2o.neo/property/nodeLabel> "neuron_region_connectivity" .
}
WHERE {
?x <http://purl.obolibrary.org/obo/RO_0002113>|<http://purl.obolibrary.org/obo/RO_0002110> ?y .
?x rdf:type owl:NamedIndividual .
} |
We have multiple use cases here and need to decide if/how to split:
(edits on branch: https://github.com/VirtualFlyBrain/vfb-pipeline-dumps/edit/connectivity_label/)
Test sparql queries here first: http://ts.p2.virtualflybrain.org/rdf4j-workbench/repositories/vfb/query
instructions for adding new queries here: https://github.com/VirtualFlyBrain/vfb-pipeline-dumps/blob/connectivity_label/dumps.Makefile#L63
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