diff --git a/GLiMMPS_functions.R b/GLiMMPS_functions.R index 97f4192..8bd227f 100644 --- a/GLiMMPS_functions.R +++ b/GLiMMPS_functions.R @@ -93,7 +93,7 @@ glmmWald.sQTL <- function(data) { if ( !( inherits(testglm,"try-error") )) { # only when it converges betas <-fixef(testglm) if (!is.na(fixef(testglm)[2])) { - snp.pval <- summary(testglm)@coefs[2,4] + snp.pval <- summary(testglm)$coefficients[2,4] } } #psi.fitted <- results$fitted.value