PHANE.md

The PHANE Project

Phylogenetic Haskell Analytic Network Engine

The Phylogenetic Haskell Analytic Network Engine (PHANE) project is collection of Haskell libraries exposing abstract interfaces intended for use general-purpose use by bioinformatics community. The project is produced by the American Museum of Natural History (AMNH); specifically the Ward Wheeler Lab of the Invertebrate Zoology Department as an undertaking of the museum's computational sciences initative.

Libraries

The PHANE project provides a number of Haskell packages, each exposing one or more libraries. All packages are located within the pkg directory. Below are the packages provided:

• PHANE-alphabet
• PHANE-dynamic-character
• PHANE-dynamic-character-alignment
• PHANE-dynamic-character-element
• PHANE-evaluation
• PHANE-file-formats
• PHANE-measure-class
• PHANE-measure-transition
• PHANE-measure-units
• PHANE-transition-matrix
• PHANE-transition-matrix-ffi
• PHANE-PhyloLib

Publications

A list of publications resulting from the PHANE project is located at:

doc/Publications.md