From c3ce6103d6842d03b09b520b13061b6dafd84ef7 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Andr=C3=A9=20Pedersen?= Date: Thu, 16 Nov 2023 15:57:45 +0100 Subject: [PATCH] Renamed new pipeline --- dsa/Dockerfile | 2 -- .../BreastEpitheliumSegmentation.py} | 0 .../BreastEpitheliumSegmentation.xml} | 0 .../__init__.py | 0 4 files changed, 2 deletions(-) rename dsa/cli/{FASTEpitheliumSegmentation/FASTEpitheliumSegmentation.py => BreastEpitheliumSegmentation/BreastEpitheliumSegmentation.py} (100%) rename dsa/cli/{FASTEpitheliumSegmentation/FASTEpitheliumSegmentation.xml => BreastEpitheliumSegmentation/BreastEpitheliumSegmentation.xml} (100%) rename dsa/cli/{FASTEpitheliumSegmentation => BreastEpitheliumSegmentation}/__init__.py (100%) diff --git a/dsa/Dockerfile b/dsa/Dockerfile index a03af37..8a548ab 100644 --- a/dsa/Dockerfile +++ b/dsa/Dockerfile @@ -62,8 +62,6 @@ ENV PYTHONPATH=$PYTHONPATH:/opt/fastpathology/dsa # copy fastpathology into working directory COPY fastpathology . -RUN ls -la - # install fastpathology python package RUN git clone https://github.com/andreped/FP-dsa-plugin.git \ && cd FP-dsa-plugin/dsa/fastpathology/ \ diff --git a/dsa/cli/FASTEpitheliumSegmentation/FASTEpitheliumSegmentation.py b/dsa/cli/BreastEpitheliumSegmentation/BreastEpitheliumSegmentation.py similarity index 100% rename from dsa/cli/FASTEpitheliumSegmentation/FASTEpitheliumSegmentation.py rename to dsa/cli/BreastEpitheliumSegmentation/BreastEpitheliumSegmentation.py diff --git a/dsa/cli/FASTEpitheliumSegmentation/FASTEpitheliumSegmentation.xml b/dsa/cli/BreastEpitheliumSegmentation/BreastEpitheliumSegmentation.xml similarity index 100% rename from dsa/cli/FASTEpitheliumSegmentation/FASTEpitheliumSegmentation.xml rename to dsa/cli/BreastEpitheliumSegmentation/BreastEpitheliumSegmentation.xml diff --git a/dsa/cli/FASTEpitheliumSegmentation/__init__.py b/dsa/cli/BreastEpitheliumSegmentation/__init__.py similarity index 100% rename from dsa/cli/FASTEpitheliumSegmentation/__init__.py rename to dsa/cli/BreastEpitheliumSegmentation/__init__.py