[SPARK-6124] Support jdbc connection properties in OPTIONS part of th…

…e query

One more thing if this PR is considered to be OK - it might make sense to add extra .jdbc() API's that take Properties to SQLContext.

Author: Volodymyr Lyubinets <[email protected]>

Closes #4859 from vlyubin/jdbcProperties and squashes the following commits:

7a8cfda [Volodymyr Lyubinets] Support jdbc connection properties in OPTIONS part of the query

sql/core/src/main/scala/org/apache/spark/sql/jdbc/JDBCRDD.scala

@@ -18,6 +18,7 @@
 package org.apache.spark.sql.jdbc
 
 import java.sql.{Connection, DriverManager, ResultSet, ResultSetMetaData, SQLException}
+import java.util.Properties
 
 import org.apache.commons.lang.StringEscapeUtils.escapeSql
 import org.apache.spark.{Logging, Partition, SparkContext, TaskContext}
@@ -90,9 +91,9 @@ private[sql] object JDBCRDD extends Logging {
    * @throws SQLException if the table specification is garbage.
    * @throws SQLException if the table contains an unsupported type.
    */
-  def resolveTable(url: String, table: String): StructType = {
+  def resolveTable(url: String, table: String, properties: Properties): StructType = {
     val quirks = DriverQuirks.get(url)
-    val conn: Connection = DriverManager.getConnection(url)
+    val conn: Connection = DriverManager.getConnection(url, properties)
     try {
       val rs = conn.prepareStatement(s"SELECT * FROM $table WHERE 1=0").executeQuery()
       try {
@@ -147,7 +148,7 @@ private[sql] object JDBCRDD extends Logging {
    *
    * @return A function that loads the driver and connects to the url.
    */
-  def getConnector(driver: String, url: String): () => Connection = {
+  def getConnector(driver: String, url: String, properties: Properties): () => Connection = {
     () => {
       try {
         if (driver != null) Class.forName(driver)
@@ -156,7 +157,7 @@ private[sql] object JDBCRDD extends Logging {
           logWarning(s"Couldn't find class $driver", e);
         }
       }
-      DriverManager.getConnection(url)
+      DriverManager.getConnection(url, properties)
     }
   }
   /**
@@ -179,6 +180,7 @@ private[sql] object JDBCRDD extends Logging {
       schema: StructType,
       driver: String,
       url: String,
+      properties: Properties,
       fqTable: String,
       requiredColumns: Array[String],
       filters: Array[Filter],
@@ -189,7 +191,7 @@ private[sql] object JDBCRDD extends Logging {
     return new
         JDBCRDD(
           sc,
-          getConnector(driver, url),
+          getConnector(driver, url, properties),
           prunedSchema,
           fqTable,
           requiredColumns,
@@ -361,7 +363,7 @@ private[sql] class JDBCRDD(
               var ans = 0L
               var j = 0
               while (j < bytes.size) {
-                ans = 256*ans + (255 & bytes(j))
+                ans = 256 * ans + (255 & bytes(j))
                 j = j + 1;
               }
               mutableRow.setLong(i, ans)

sql/core/src/main/scala/org/apache/spark/sql/jdbc/JDBCRelation.scala

@@ -17,16 +17,17 @@
 
 package org.apache.spark.sql.jdbc
 
-import org.apache.spark.rdd.RDD
-import org.apache.spark.sql.catalyst.expressions.Row
-import org.apache.spark.sql.types.StructType
+import java.sql.DriverManager
+import java.util.Properties
 
 import scala.collection.mutable.ArrayBuffer
-import java.sql.DriverManager
 
 import org.apache.spark.Partition
+import org.apache.spark.rdd.RDD
 import org.apache.spark.sql.SQLContext
+import org.apache.spark.sql.catalyst.expressions.Row
 import org.apache.spark.sql.sources._
+import org.apache.spark.sql.types.StructType
 
 /**
  * Data corresponding to one partition of a JDBCRDD.
@@ -115,18 +116,21 @@ private[sql] class DefaultSource extends RelationProvider {
         numPartitions.toInt)
     }
     val parts = JDBCRelation.columnPartition(partitionInfo)
-    JDBCRelation(url, table, parts)(sqlContext)
+    val properties = new Properties() // Additional properties that we will pass to getConnection
+    parameters.foreach(kv => properties.setProperty(kv._1, kv._2))
+    JDBCRelation(url, table, parts, properties)(sqlContext)
   }
 }
 
 private[sql] case class JDBCRelation(
     url: String,
     table: String,
-    parts: Array[Partition])(@transient val sqlContext: SQLContext)
+    parts: Array[Partition],
+    properties: Properties = new Properties())(@transient val sqlContext: SQLContext)
   extends BaseRelation
   with PrunedFilteredScan {
 
-  override val schema: StructType = JDBCRDD.resolveTable(url, table)
+  override val schema: StructType = JDBCRDD.resolveTable(url, table, properties)
 
   override def buildScan(requiredColumns: Array[String], filters: Array[Filter]): RDD[Row] = {
     val driver: String = DriverManager.getDriver(url).getClass.getCanonicalName
@@ -135,6 +139,7 @@ private[sql] case class JDBCRelation(
       schema,
       driver,
       url,
+      properties,
       table,
       requiredColumns,
       filters,

sql/core/src/test/scala/org/apache/spark/sql/jdbc/JDBCSuite.scala

@@ -19,22 +19,31 @@ package org.apache.spark.sql.jdbc
 
 import java.math.BigDecimal
 import java.sql.DriverManager
-import java.util.{Calendar, GregorianCalendar}
+import java.util.{Calendar, GregorianCalendar, Properties}
 
 import org.apache.spark.sql.test._
+import org.h2.jdbc.JdbcSQLException
 import org.scalatest.{FunSuite, BeforeAndAfter}
 import TestSQLContext._
 import TestSQLContext.implicits._
 
 class JDBCSuite extends FunSuite with BeforeAndAfter {
   val url = "jdbc:h2:mem:testdb0"
+  val urlWithUserAndPass = "jdbc:h2:mem:testdb0;user=testUser;password=testPass"
   var conn: java.sql.Connection = null
 
   val testBytes = Array[Byte](99.toByte, 134.toByte, 135.toByte, 200.toByte, 205.toByte)
 
   before {
     Class.forName("org.h2.Driver")
-    conn = DriverManager.getConnection(url)
+    // Extra properties that will be specified for our database. We need these to test
+    // usage of parameters from OPTIONS clause in queries.
+    val properties = new Properties()
+    properties.setProperty("user", "testUser")
+    properties.setProperty("password", "testPass")
+    properties.setProperty("rowId", "false")
+
+    conn = DriverManager.getConnection(url, properties)
     conn.prepareStatement("create schema test").executeUpdate()
     conn.prepareStatement("create table test.people (name TEXT(32) NOT NULL, theid INTEGER NOT NULL)").executeUpdate()
     conn.prepareStatement("insert into test.people values ('fred', 1)").executeUpdate()
@@ -46,15 +55,15 @@ class JDBCSuite extends FunSuite with BeforeAndAfter {
       s"""
         |CREATE TEMPORARY TABLE foobar
         |USING org.apache.spark.sql.jdbc
-        |OPTIONS (url '$url', dbtable 'TEST.PEOPLE')
+        |OPTIONS (url '$url', dbtable 'TEST.PEOPLE', user 'testUser', password 'testPass')
       """.stripMargin.replaceAll("\n", " "))
 
     sql(
       s"""
         |CREATE TEMPORARY TABLE parts
         |USING org.apache.spark.sql.jdbc
-        |OPTIONS (url '$url', dbtable 'TEST.PEOPLE',
-        |partitionColumn 'THEID', lowerBound '1', upperBound '4', numPartitions '3')
+        |OPTIONS (url '$url', dbtable 'TEST.PEOPLE', user 'testUser', password 'testPass',
+        |         partitionColumn 'THEID', lowerBound '1', upperBound '4', numPartitions '3')
       """.stripMargin.replaceAll("\n", " "))
 
     conn.prepareStatement("create table test.inttypes (a INT, b BOOLEAN, c TINYINT, "
@@ -68,12 +77,12 @@ class JDBCSuite extends FunSuite with BeforeAndAfter {
       s"""
         |CREATE TEMPORARY TABLE inttypes
         |USING org.apache.spark.sql.jdbc
-        |OPTIONS (url '$url', dbtable 'TEST.INTTYPES')
+        |OPTIONS (url '$url', dbtable 'TEST.INTTYPES', user 'testUser', password 'testPass')
       """.stripMargin.replaceAll("\n", " "))
 
     conn.prepareStatement("create table test.strtypes (a BINARY(20), b VARCHAR(20), "
       + "c VARCHAR_IGNORECASE(20), d CHAR(20), e BLOB, f CLOB)").executeUpdate()
-    var stmt = conn.prepareStatement("insert into test.strtypes values (?, ?, ?, ?, ?, ?)")
+    val stmt = conn.prepareStatement("insert into test.strtypes values (?, ?, ?, ?, ?, ?)")
     stmt.setBytes(1, testBytes)
     stmt.setString(2, "Sensitive")
     stmt.setString(3, "Insensitive")
@@ -85,7 +94,7 @@ class JDBCSuite extends FunSuite with BeforeAndAfter {
       s"""
         |CREATE TEMPORARY TABLE strtypes
         |USING org.apache.spark.sql.jdbc
-        |OPTIONS (url '$url', dbtable 'TEST.STRTYPES')
+        |OPTIONS (url '$url', dbtable 'TEST.STRTYPES', user 'testUser', password 'testPass')
       """.stripMargin.replaceAll("\n", " "))
 
     conn.prepareStatement("create table test.timetypes (a TIME, b DATE, c TIMESTAMP)"
@@ -97,7 +106,7 @@ class JDBCSuite extends FunSuite with BeforeAndAfter {
       s"""
         |CREATE TEMPORARY TABLE timetypes
         |USING org.apache.spark.sql.jdbc
-        |OPTIONS (url '$url', dbtable 'TEST.TIMETYPES')
+        |OPTIONS (url '$url', dbtable 'TEST.TIMETYPES', user 'testUser', password 'testPass')
       """.stripMargin.replaceAll("\n", " "))
 
 
@@ -112,7 +121,7 @@ class JDBCSuite extends FunSuite with BeforeAndAfter {
       s"""
         |CREATE TEMPORARY TABLE flttypes
         |USING org.apache.spark.sql.jdbc
-        |OPTIONS (url '$url', dbtable 'TEST.FLTTYPES')
+        |OPTIONS (url '$url', dbtable 'TEST.FLTTYPES', user 'testUser', password 'testPass')
       """.stripMargin.replaceAll("\n", " "))
 
     // Untested: IDENTITY, OTHER, UUID, ARRAY, and GEOMETRY types.
@@ -174,16 +183,17 @@ class JDBCSuite extends FunSuite with BeforeAndAfter {
   }
 
   test("Basic API") {
-    assert(TestSQLContext.jdbc(url, "TEST.PEOPLE").collect.size == 3)
+    assert(TestSQLContext.jdbc(urlWithUserAndPass, "TEST.PEOPLE").collect.size == 3)
   }
 
   test("Partitioning via JDBCPartitioningInfo API") {
-    assert(TestSQLContext.jdbc(url, "TEST.PEOPLE", "THEID", 0, 4, 3).collect.size == 3)
+    assert(TestSQLContext.jdbc(urlWithUserAndPass, "TEST.PEOPLE", "THEID", 0, 4, 3)
+      .collect.size == 3)
   }
 
   test("Partitioning via list-of-where-clauses API") {
     val parts = Array[String]("THEID < 2", "THEID >= 2")
-    assert(TestSQLContext.jdbc(url, "TEST.PEOPLE", parts).collect.size == 3)
+    assert(TestSQLContext.jdbc(urlWithUserAndPass, "TEST.PEOPLE", parts).collect.size == 3)
   }
 
   test("H2 integral types") {
@@ -216,7 +226,6 @@ class JDBCSuite extends FunSuite with BeforeAndAfter {
     assert(rows(0).getString(5).equals("I am a clob!"))
   }
 
-
   test("H2 time types") {
     val rows = sql("SELECT * FROM timetypes").collect()
     val cal = new GregorianCalendar(java.util.Locale.ROOT)
@@ -246,17 +255,31 @@ class JDBCSuite extends FunSuite with BeforeAndAfter {
         .equals(new BigDecimal("123456789012345.54321543215432100000")))
   }
 
-
   test("SQL query as table name") {
     sql(
       s"""
         |CREATE TEMPORARY TABLE hack
         |USING org.apache.spark.sql.jdbc
-        |OPTIONS (url '$url', dbtable '(SELECT B, B*B FROM TEST.FLTTYPES)')
+        |OPTIONS (url '$url', dbtable '(SELECT B, B*B FROM TEST.FLTTYPES)',
+        |         user 'testUser', password 'testPass')
       """.stripMargin.replaceAll("\n", " "))
     val rows = sql("SELECT * FROM hack").collect()
     assert(rows(0).getDouble(0) == 1.00000011920928955) // Yes, I meant ==.
     // For some reason, H2 computes this square incorrectly...
     assert(math.abs(rows(0).getDouble(1) - 1.00000023841859331) < 1e-12)
   }
+
+  test("Pass extra properties via OPTIONS") {
+    // We set rowId to false during setup, which means that _ROWID_ column should be absent from
+    // all tables. If rowId is true (default), the query below doesn't throw an exception.
+    intercept[JdbcSQLException] {
+      sql(
+        s"""
+          |CREATE TEMPORARY TABLE abc
+          |USING org.apache.spark.sql.jdbc
+          |OPTIONS (url '$url', dbtable '(SELECT _ROWID_ FROM test.people)',
+          |         user 'testUser', password 'testPass')
+        """.stripMargin.replaceAll("\n", " "))
+    }
+  }
 }