example_partaligned_2.fas

>A1 group_A
CGGTAGGAAAGAAAGCAACG------TTCGGTTTTATAGGATATTCGAAGCGCCATCCGT
ACAACCCTCGCCCCTGAC-------CTGTACTGCAGCGCAAAACGGCGATCATGCCCTGA
---TGCGGAAGGTGCGATAAAGGTCGCAATGCACATCGGACAGTATCACATCCCGAGTAT
GGATAACCGGACACCCACTAAATGTGGCCAAAACGA
>A2 group_A
CGGGGGGTAAGAAAGCAACG------TTCGGTTTTATCGGATATTCGGAGCGCCATCCGT
ACAACCCTCGCCCCTGAC-------CTGTACTGCAGCGCAAAACGGGGATCATGCCCTGA
ACGAGCGGAAGGTGCGAAAAAGGTCGCAATGCACGTCGGACAGTATCACATCCCGAGTAT
GGATAACCGGACACCCACTAAATCTGGCCAAAACGA
>A3 group_A
CGGGAGGTAAGAAAGCAACGATATAACTCGGTTTTATAGGATATTCGGAGCGCCATCAGT
ACAACCCTCGCCCCTGACACGCTCACTGTACTGCAGCGCAAGACGGGGATCATCCTCTGA
ACGTGCGGAACGTGCGAAAAATGTCGCAATGCACGTAGGACAGTATCACATC-----TAT
GGATAACCTGACACCCACTAAATGTGACCAAAACGA
>A4 group_A
CGGGAGGTAAGAAAGCAACGATATAACTCGGTTTTATAGGATATTCGGAGCGCCATCAGT
ACAACCCTCGCCCCTGACACGTTCACTGTACTGCAGCGCAAAACGGGGATCATCCCCTGA
ACGTGCGGAAGGTGCGGAAAATGTCGCAATGCACGTAGGACAGTATCACATC-----TAT
GGATAACCGGACACCCACTAAATGTGGCCAAAACGA
>A5 
CTGGAGGTAAGAAAGCAACGCTCGGATTCATAGGATATTCGCAGCTCCATCCGTACAACC
CGCCACACGCTCACTCTACTGCAGCGGAAAACGGGTGAGCGTGCGGAAGGTGAGAAAAAC
CTCGCAATGCACGTCGGTCAGTATCACAGCTATGGATAACCGGACACCCATTAAATGTGG
CCAAAACGA
>A6 group_A
CTGGAGGTAAGAAAGCAACG------CTCGGATTCATAGGATATTCGCAGCGCCATCCGT
ACAACC--CGCC----ACACGCTCACTGTACTGCAGCGGAAAACGGG----------TGA
GCGTGCGGAAGGTGCGAAAAACGTCGCAATGCACGTCGGACAGTATCACAGC-----TAT
GGATAACCGGACACACACTAAATGTGGGCAAAACGA
>A7 group_A
CGGGAGGTAAGAAAGCAACG------CTCGGATTTATAGGATATTCGCGGCGCCATCCGT
ACAACCCTCGCC----ACACGCTCACTCTACGGCAGCGGAAAACGGG----------TGA
CCGTGCGGAAGGTGCGAAAAACGTCGCAATGCACGTCGGACAGTATCACAGC-----TAT
GGATAACCGAACACCCACTAAATGTGGCAAAAACAA
>A8 group_A
CGGGAGGTAAGAATGCAACG------CTCGGTTTTATAGGATATTCGCAGCGCCATCCGT
ACAATCCTCGCC----ACACACTCACTGTACTTCAGCGGAAAACGGG----------TGA
CCGTGCGGAAGGTGCGAAAAACGTCGCAATGCACGTCGGACAGTATCACAGC-----TAT
GGATAACCGGACACCGACTAAATGTGGCAAAAACAA
>B1
GGGGTGCAAACACAGCAACGCTCATATTTATACGATAACCGGAGCGCCACCCATACAAAC
CGCGAGAGTCAGACGCTCACTGTAAGCACTCATCGGGAGCACGTGAGGACGTCGCGATGC
ACGCAGCACAGTATCACATATGGATAACCGGTCGCACTCTAAATGAGAAGCCTAATCGAC
T
>B2
GGCGTGAAAATACAGAACGCTCATATTTATACGATATTCGGAGCGCCACCCCTACAAACC
GCGACAGTCAAACGCTCACTGTAAGCACTAATCGGGAGCACGTGAGGACGTCGCAACGCA
CCGCACCGTATCACATATGGATAACCGGTCGAACTCTAAATGAGGCCTAATCGACT
>B3
GGGGTGCAAATACAGCAACGCTCATATTTATACGATATACGGAGCGCCACCCCTACAAAC
CGCGACTGTCAGACGCTCCCTGTATGCACTAAACGGGCGCACGTGAGGACGTCGCAATGC
ACGCCGCACAGTATCACGTATGGATAACCGGTCGCACTCTAAATGAGGCCTAATCGACT
>B4
GGGGTGCAAATACAGCAACGCTCATATTTTTACGATATTCGGAGCCCTCCCCTACAAACG
GCGACAGTCAGCTCCCTGTATGCACTAAACGCGCACGTGAGGACGTCGCAATGCACGCCG
TACAGTATCACGTATGGATAACCGGTCGCACTCTAAAGGTGGCATACTCGACT
>B5
GGGGTGCAAAGAGAGCAACGCTCAGATTGATACTATATTCGGAGTGCCACCCCTACAAAC
CGCGACAGTAAGACGCTCACTGTATCCAGCACTAAACGGGAGCACGTGCCGTCGGAATGC
ACGCCGCACAGAATCCACGTATGGATAACCGGTCGCACTCTAGATGAGGCCTAATCGACT
>B6
GGGGTGCAAAGAGAGCACCGCTCAGATTGATACTATATTCGGAGTGCCACCTCTACAAAC
CGCGACAGTAAGACGCTCACTGTATCCAGCACTAAACGGGAGCAGTCGGAATGCACGCCG
CACAGTATCACGTATGGCTAACCGGTCGCACTCTAGATGAGGCCTAATCGACT
>B7
GGGTTGCAAAGACAGCAACACTCAGATTGATACGATATTCGGAGGGCAACCCCGACCAAC
CGCGACAGTAAGACGCTCACTGTATCCAGCACTAATCGGGAGCACGTGAGGACGTCGCAA
TGTACGCCGCACAGTATCACATATGGATAACCGGTCGCACTCTAGATGAGGCCTAGTCGT
CT
>B8
GGGTTGCAAAGACAGCAACACTCAGATTGATACGATATTCGGAGGGCAACCCCGACCAAC
CGCGAGAGTAAGACGCTCACTGTATCCAGTACTAAACGGGAGCTCGTGAGGACGTCGCAA
TGTACGCCGCACAGTATCACATATGGATATCCGGTCGCACTCTAGATGAGGCCTAGTCGT
TT
>C1 group_C
CGGGGTGATAGAAATCTTGCCGAGAGTGTCGGACA--C----GGCCA-GCCTCATCCATG
GCCACCGTCGTCCGTTCGACGCTCATTCTTTCCAGGCCTCGCG--GTTCGATTGGTCGGA
----TGGCGGAATTCTAAAAGGGACATGCAAGACGATGTGTGACGCACAGTATTCGTCGG
AGT---TGAACGTTCGCCCACTA----GACGTTACATCGACG
>C2 group_C
CGGGGTGATAGAAATCTTGCCGAGAGTGTCGGACA--C----GGCCA-GCCTCATCCATG
ACAACCGTCGTCCGTTCTACGCTCATTCTTTCCAGGCCTCGCG--GTTCAATTGGTCGGA
----TGGAGGAATTCT-----GGAAATTCAAGACGATGTGTGCCGCACAGTATTCACCGG
AGT---TGAACGTTCGCCCACTA----TACGTTACATCGACG
>C3 group_C
CGGGGTAATAGAAATCTTGCCGAGAGTGTCGGACAACC----GGCCACGCCTCATCCATG
ACAACCCTCGTCCGTTCCACGCTCATTCTTTCCAGGCCTCGCG--GTTCATT----CGGG
TATATGGAGGAATTCTAAAAGGGACATGCAAGACGATGTGTGCCGCACAGTATCCGTAGG
AAT---TGCATGTTTGCCCACTA----GACGTTAAATCGAGG
>C4 group_C
CGGGGTAATAGAAATCTTGCCGAGAGTGTTGGACAACC----GGCCA-GCCTCATCCATG
ACAACCGTCGTCCGTTCCACGCTCATTCTTTCCAGGCTTCGCG--GGTCAAT----CGGG
TATATGGAGGAATTCTAAAAGGGACATGCAAGACAATGTGTGCCGCACAGTATCCGTAGG
AAT---TGCATGTTTGCCCACTA----GACGTTACATCGAGG
>C5 group_C
CGGGGTGATAGAAAACTTGCCGAGGGTGTCGGACA--CTCGTGG----GCCTCATCTATG
ACAACCGTCGTCCGTTCCACGCTCTTTCTTTCCAGGCCTCGCG--GTTCAATTGTTCGGA
----TGGAGGAATTCTAAAAGGGACATGCTAGACTATGTCTGGCGCACAGTATCCGTAGG
AAT---TCAACGTTCGCCCACTACTTCGACGTTACATCGACG
>C6 group_C
GGGGGTGATAGAAAACTTGCCGAGAGTGTCGGACA--CTCGTGG----GCCTCATCCATG
ACAACCGTCGTCCGTTCCACGCTCTTTCTTTCCAGGCCTCGCGCGGTTCAATTGTTCGGA
----TGGAGGAATTTTAAAAGGGACATGCTAGACTATGTCTGGCGCACAGTATCCGTAGG
AATCGGTCAACGTTCGCCCACTACTTCGACGTTACATCGACG
>C7 group_C
CGGGGTGATAGAAGTCTTGCCGAGA-TGTCGGACA--CTCGTGG----CCCTCATCCATG
ACAACAGTCGTCCGTTCCACGCTCTTTCTTTCCAGGCCTCGCC--GTTCAATTGTTCGGA
----TGGAGGAATTCTAAAAGGGACATGCAAGACTATGTCTGCCGCACAGTATCCGTATG
TA----------TTCGTCCACTACTTCGACGTTACATCGACG
>C8 group_C
CGGGGTGATAGAAGTCTTGCCGAGAGTGTCGGACA--CTCGTGG----CCCTCATCCATG
ACAACCGTCGTCCGTTCCACGCTCTTTCTTTCCAGGCCTCGCG--GTTCACTTGTTCGGA
----TGGAGGAATTCTAAAAGGGACATGCAAGACTATGTCTGCCGCACAGTATCCGTATG
AA----------TTTGCCCACTACTTCGACGGTACATCGACG
>D1 group_D
AGGGGTGAGTTAGAATGCG------GAGATTCTCGG-ACACTCGGGGCCTAATCCAGTAC
AA--GTCCTCCTGTTCCACGCTCGGTTTATCCGGGTCTCACTTGTCCATCCTTCGGATGG
AGGGATCCTCATAGGTGTCAGACTATATGCGCCGCACAGTCTCCAGTCTGTGTTGCCAGT
CCCCCACCAGACG-TTACATTGTCG
>D2 group_D
AGGGGTGAGTTAGAATGCG------GAGATTCTCGG-ACACTCTGGGCCTAATCCAGTAC
AA--GTCCTCCTGTTCCACGCTCGTTTTATCCGGGTCTCACTTGTCCATCGTTCGGATGG
AGGGATCCTCATAGGTTTCAGACTATATGCGCCGCACAGTCTCCCGTCTGTGTTGCCAGT
CCCCCACCAGACG-TTACATTGTCG
>D3 group_D
AGGGGTGAGTTAGAATGCG------GAG---CTCGG-ACACTCGGGGCGTAATCCAGTAC
AACCGTCCTCCTGTTCCACGCTCGTTCTATCCGAGTCTGACTTGTCCACCGTTCGGATGG
AGGGATACTCATAGGTGCCAGACTACATGCGCCGCACAGTATCCCGT----GTTGCCGTT
CCCCCACCAGACG-TCACATTGTCG
>D4 group_D
AGGGGTGAGTTAGAATGCG------GAG---CTCGG-AAACTCGGGGCCTAATCCAGTAC
AACCGTCCTCCTGTTCCACGCTCGTTCTATCCGGGTCTGACTTGTCCATCGTTCGGATGG
AGGGATACTCATAGGTGCCAGACTACATGCGCCGCACAGTATCCCGT----GTTGCCGGT
CCCCCACCAGACG-TTGCATTGTCG
>D5 group_D
AGGAGAGAGTTAGAATGCGCATGTAGAAATTCTCGGTACACTCGGGGCCTCATCCAATAC
AACCGTCCTCCTGTTCCACGCTCGTTCTATCCGGGTCTGACTTGTCAATCGTTCGGATGG
A--GATCCTCATAGGTGCCAGACTATGTGCGCCGCACCGTATCCCGTCTGTGTTGTCGGT
CGCCCACCAGACGCTTACATTGTCG
>D6 group_D
AGGAGAGAGTTAGAATGCGCATGTAGAGATTCTCGGTACACTCGGGGCCTCATCCAATAC
-ACCGTCCTCCTGTTCCACGCCCGTTCTATCCGGGTCTGACTTGTCAATCGTTCGGATGG
A--GATCCTCATAGGTGCCAGACTATGTGCGCCGCACCGTATCCCGTCTGTGTTGTCGGT
CGCCCACCAGACGCTTACATTGTCG
>D7 group_D
AGGGGTGAGTTAGAATGCG------GAGACTCTCGG-ACACTCGGGGCCTCAT-CAATAC
AACCGTCCTCCTGTTCCACGCTAGTTCTATCCGGGTCTGACTTGTCAATCGTACGGATGG
A--GATCGTCATAGGTGCCAGTCTATGTGCGCCGCACCGTATCCCGTCTGTGTTGTCGGT
CGCCCAGCACACG-TTACATTGTCG
>D8 group_D
AGGGGTGAGTTAGAATGCG------GAGATTCTCGG-ACACTCGGGGCCTCATCCAATAC
CACCGTCCTCCTGTTCCACGCTCGTTCTGTCCGGGTATGACTTGTCAATCGTACGGATGG
A--GATCCTCATAGCTGCCAGTCTATGTGCGCCGCACCGTATCGCATCTGTGTTGTCGGT
CGCTCAGCACACG-TTACATTGTCG