Fix for multi-contig references in map #60
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Short contigs may be skipped entirely due to no matches, so need to keep advancing writer
Codecov ReportAll modified lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## master #60 +/- ##
==========================================
- Coverage 92.50% 92.50% -0.01%
==========================================
Files 16 16
Lines 2176 2175 -1
==========================================
- Hits 2013 2012 -1
Misses 163 163
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Short contigs may be skipped entirely due to no matches, so need to keep advancing writer
Closes #59