diff --git a/CHANGELOG.rst b/CHANGELOG.rst
index e671b553..9c15337c 100644
--- a/CHANGELOG.rst
+++ b/CHANGELOG.rst
@@ -5,6 +5,43 @@ Changelog for the SODAR project. Loosely follows the
`Keep a Changelog `_ guidelines.
+Unreleased
+==========
+
+Added
+-----
+
+- **General**
+ - Python v3.11 support (#1922, #1978)
+- **Landingzones**
+ - REST API list view pagination (#1994)
+- **Samplesheets**
+ - REST API list view pagination (#1994)
+
+Changed
+-------
+
+- **General**
+ - Upgrade to django-sodar-core v1.0.2 (#1922)
+ - Upgrade to Postgres v16 (#1922)
+ - Upgrade Python and Vue app dependencies (#1922, #1959)
+- **Irodsinfo**
+ - Update REST API versioning (#1936)
+- **Landingzones**
+ - Update REST API versioning (#1936)
+ - Update REST API views for OpenAPI compatibility (#1951)
+- **Samplesheets**
+ - Update REST API versioning (#1936)
+ - Update REST API views for OpenAPI compatibility (#1951)
+
+Removed
+-------
+
+- **General**
+ - Python v3.8 support (#1922)
+ - Postgres `.
+v1.0.0 (WIP)
+============
+
+Release for SODAR Core v1.0 upgrade and feature updates.
+
+- Add Python v3.11 support
+- Add REST API list view pagination
+- Update REST API versioning
+- Update REST API views for OpenAPI support
+- Upgrade to Postgres v16
+- Upgrade to SODAR Core v1.0.2
+- SODAR Core v1.0 updates: OIDC auth support, new REST API versioning,
+ owner/delegate remote sync controls etc.
+- Upgrade to Django v4.2
+- Remove Python v3.8 support
+- Remove Postgres <12 support
+
+Migration Guide
+---------------
+
+Python Version Support
+ Python v3.11 is now the recommended Python version. Support for v3.8 has
+ been dropped. It is recommended to upgrade your deployment for Python v3.11.
+PostgreSQL Version Support
+ This release drops support for Postgres versions below v12. The recommended
+ version is v16. Note that if you run both the SODAR Server and the iRODS
+ iCAT server on the same PostgreSQL database server, you may need to upgrade
+ your iRODS server. The CUBI iRODS v4.2 Docker image does not support
+ Postgres >11. See the latest dev version of sodar-docker-compose for more
+ information.
+REST API Versioning Changes
+ REST API versioning has changed in SODAR Core v1.0 and SODAR Server v1.0.
+ Accept header versioning is now specific to each Django app providing their
+ own API. The APIs now use semantic versioning and have individual version
+ numbers starting at ``1.0``. There is no backwards compatibility for old
+ version numbers. If your clients or scripts make use of the versioning, you
+ will need to consult the REST API documentation and update them accordingly.
+
+.. warning::
+
+ It is strongly recommended to backup your SODAR and iRODS databases before
+ upgrading to this version due to the changed database requirements. Also it
+ is strongly recommended to go through all documentation before upgrading.
+
+
v0.15.1 (2024-09-12)
====================
diff --git a/samplesheets/vueapp/package-lock.json b/samplesheets/vueapp/package-lock.json
index da69140a..48e8984a 100644
--- a/samplesheets/vueapp/package-lock.json
+++ b/samplesheets/vueapp/package-lock.json
@@ -1,12 +1,12 @@
{
"name": "samplesheets",
- "version": "0.15.1",
+ "version": "1.0.0-WIP",
"lockfileVersion": 3,
"requires": true,
"packages": {
"": {
"name": "samplesheets",
- "version": "0.15.1",
+ "version": "1.0.0-WIP",
"dependencies": {
"bootstrap-vue": "^2.22.0",
"core-js": "^3.23.5",
@@ -5240,9 +5240,9 @@
"dev": true
},
"node_modules/body-parser": {
- "version": "1.20.2",
- "resolved": "https://registry.npmjs.org/body-parser/-/body-parser-1.20.2.tgz",
- "integrity": "sha512-ml9pReCu3M61kGlqoTm2umSXTlRTuGTx0bfYj+uIUKKYycG5NtSbeetV3faSU6R7ajOPw0g/J1PvK4qNy7s5bA==",
+ "version": "1.20.3",
+ "resolved": "https://registry.npmjs.org/body-parser/-/body-parser-1.20.3.tgz",
+ "integrity": "sha512-7rAxByjUMqQ3/bHJy7D6OGXvx/MMc4IqBn/X0fcM1QUcAItpZrBEYhWGem+tzXH90c+G01ypMcYJBO9Y30203g==",
"dev": true,
"dependencies": {
"bytes": "3.1.2",
@@ -5253,7 +5253,7 @@
"http-errors": "2.0.0",
"iconv-lite": "0.4.24",
"on-finished": "2.4.1",
- "qs": "6.11.0",
+ "qs": "6.13.0",
"raw-body": "2.5.2",
"type-is": "~1.6.18",
"unpipe": "1.0.0"
@@ -7092,9 +7092,9 @@
}
},
"node_modules/encodeurl": {
- "version": "1.0.2",
- "resolved": "https://registry.npmjs.org/encodeurl/-/encodeurl-1.0.2.tgz",
- "integrity": "sha512-TPJXq8JqFaVYm2CWmPvnP2Iyo4ZSM7/QKcSmuMLDObfpH5fi7RUGmd/rTDf+rut/saiDiQEeVTNgAmJEdAOx0w==",
+ "version": "2.0.0",
+ "resolved": "https://registry.npmjs.org/encodeurl/-/encodeurl-2.0.0.tgz",
+ "integrity": "sha512-Q0n9HRi4m6JuGIV1eFlmvJB7ZEVxu93IrMyiMsGC0lrMJMWzRgx6WGquyfQgZVb31vhGgXnfmPNNXmxnOkRBrg==",
"dev": true,
"engines": {
"node": ">= 0.8"
@@ -8253,37 +8253,37 @@
}
},
"node_modules/express": {
- "version": "4.19.2",
- "resolved": "https://registry.npmjs.org/express/-/express-4.19.2.tgz",
- "integrity": "sha512-5T6nhjsT+EOMzuck8JjBHARTHfMht0POzlA60WV2pMD3gyXw2LZnZ+ueGdNxG+0calOJcWKbpFcuzLZ91YWq9Q==",
+ "version": "4.21.0",
+ "resolved": "https://registry.npmjs.org/express/-/express-4.21.0.tgz",
+ "integrity": "sha512-VqcNGcj/Id5ZT1LZ/cfihi3ttTn+NJmkli2eZADigjq29qTlWi/hAQ43t/VLPq8+UX06FCEx3ByOYet6ZFblng==",
"dev": true,
"dependencies": {
"accepts": "~1.3.8",
"array-flatten": "1.1.1",
- "body-parser": "1.20.2",
+ "body-parser": "1.20.3",
"content-disposition": "0.5.4",
"content-type": "~1.0.4",
"cookie": "0.6.0",
"cookie-signature": "1.0.6",
"debug": "2.6.9",
"depd": "2.0.0",
- "encodeurl": "~1.0.2",
+ "encodeurl": "~2.0.0",
"escape-html": "~1.0.3",
"etag": "~1.8.1",
- "finalhandler": "1.2.0",
+ "finalhandler": "1.3.1",
"fresh": "0.5.2",
"http-errors": "2.0.0",
- "merge-descriptors": "1.0.1",
+ "merge-descriptors": "1.0.3",
"methods": "~1.1.2",
"on-finished": "2.4.1",
"parseurl": "~1.3.3",
- "path-to-regexp": "0.1.7",
+ "path-to-regexp": "0.1.10",
"proxy-addr": "~2.0.7",
- "qs": "6.11.0",
+ "qs": "6.13.0",
"range-parser": "~1.2.1",
"safe-buffer": "5.2.1",
- "send": "0.18.0",
- "serve-static": "1.15.0",
+ "send": "0.19.0",
+ "serve-static": "1.16.2",
"setprototypeof": "1.2.0",
"statuses": "2.0.1",
"type-is": "~1.6.18",
@@ -8310,9 +8310,9 @@
"dev": true
},
"node_modules/express/node_modules/path-to-regexp": {
- "version": "0.1.7",
- "resolved": "https://registry.npmjs.org/path-to-regexp/-/path-to-regexp-0.1.7.tgz",
- "integrity": "sha512-5DFkuoqlv1uYQKxy8omFBeJPQcdoE07Kv2sferDCrAq1ohOU+MSDswDIbnx3YAM60qIOnYa53wBhXW0EbMonrQ==",
+ "version": "0.1.10",
+ "resolved": "https://registry.npmjs.org/path-to-regexp/-/path-to-regexp-0.1.10.tgz",
+ "integrity": "sha512-7lf7qcQidTku0Gu3YDPc8DJ1q7OOucfa/BSsIwjuh56VU7katFvuM8hULfkwB3Fns/rsVF7PwPKVw1sl5KQS9w==",
"dev": true
},
"node_modules/extend-shallow": {
@@ -8503,13 +8503,13 @@
}
},
"node_modules/finalhandler": {
- "version": "1.2.0",
- "resolved": "https://registry.npmjs.org/finalhandler/-/finalhandler-1.2.0.tgz",
- "integrity": "sha512-5uXcUVftlQMFnWC9qu/svkWv3GTd2PfUhK/3PLkYNAe7FbqJMt3515HaxE6eRL74GdsriiwujiawdaB1BpEISg==",
+ "version": "1.3.1",
+ "resolved": "https://registry.npmjs.org/finalhandler/-/finalhandler-1.3.1.tgz",
+ "integrity": "sha512-6BN9trH7bp3qvnrRyzsBz+g3lZxTNZTbVO2EV1CS0WIcDbawYVdYvGflME/9QP0h0pYlCDBCTjYa9nZzMDpyxQ==",
"dev": true,
"dependencies": {
"debug": "2.6.9",
- "encodeurl": "~1.0.2",
+ "encodeurl": "~2.0.0",
"escape-html": "~1.0.3",
"on-finished": "2.4.1",
"parseurl": "~1.3.3",
@@ -13130,10 +13130,13 @@
"dev": true
},
"node_modules/merge-descriptors": {
- "version": "1.0.1",
- "resolved": "https://registry.npmjs.org/merge-descriptors/-/merge-descriptors-1.0.1.tgz",
- "integrity": "sha512-cCi6g3/Zr1iqQi6ySbseM1Xvooa98N0w31jzUYrXPX2xqObmFGHJ0tQ5u74H3mVh7wLouTseZyYIq39g8cNp1w==",
- "dev": true
+ "version": "1.0.3",
+ "resolved": "https://registry.npmjs.org/merge-descriptors/-/merge-descriptors-1.0.3.tgz",
+ "integrity": "sha512-gaNvAS7TZ897/rVaZ0nMtAyxNyi/pdbjbAwUpFQpN70GqnVfOiXpeUUMKRBmzXaSQ8DdTX4/0ms62r2K+hE6mQ==",
+ "dev": true,
+ "funding": {
+ "url": "https://github.com/sponsors/sindresorhus"
+ }
},
"node_modules/merge-source-map": {
"version": "1.1.0",
@@ -14942,12 +14945,12 @@
}
},
"node_modules/qs": {
- "version": "6.11.0",
- "resolved": "https://registry.npmjs.org/qs/-/qs-6.11.0.tgz",
- "integrity": "sha512-MvjoMCJwEarSbUYk5O+nmoSzSutSsTwF85zcHPQ9OrlFoZOYIjaqBAJIqIXjptyD5vThxGq52Xu/MaJzRkIk4Q==",
+ "version": "6.13.0",
+ "resolved": "https://registry.npmjs.org/qs/-/qs-6.13.0.tgz",
+ "integrity": "sha512-+38qI9SOr8tfZ4QmJNplMUxqjbe7LKvvZgWdExBOmd+egZTtjLB67Gu0HRX3u/XOq7UU2Nx6nsjvS16Z9uwfpg==",
"dev": true,
"dependencies": {
- "side-channel": "^1.0.4"
+ "side-channel": "^1.0.6"
},
"engines": {
"node": ">=0.6"
@@ -15506,9 +15509,9 @@
}
},
"node_modules/send": {
- "version": "0.18.0",
- "resolved": "https://registry.npmjs.org/send/-/send-0.18.0.tgz",
- "integrity": "sha512-qqWzuOjSFOuqPjFe4NOsMLafToQQwBSOEpS+FwEt3A2V3vKubTquT3vmLTQpFgMXp8AlFWFuP1qKaJZOtPpVXg==",
+ "version": "0.19.0",
+ "resolved": "https://registry.npmjs.org/send/-/send-0.19.0.tgz",
+ "integrity": "sha512-dW41u5VfLXu8SJh5bwRmyYUbAoSB3c9uQh6L8h/KtsFREPWpbX1lrljJo186Jc4nmci/sGUZ9a0a0J2zgfq2hw==",
"dev": true,
"dependencies": {
"debug": "2.6.9",
@@ -15544,6 +15547,15 @@
"integrity": "sha512-Tpp60P6IUJDTuOq/5Z8cdskzJujfwqfOTkrwIwj7IRISpnkJnT6SyJ4PCPnGMoFjC9ddhal5KVIYtAt97ix05A==",
"dev": true
},
+ "node_modules/send/node_modules/encodeurl": {
+ "version": "1.0.2",
+ "resolved": "https://registry.npmjs.org/encodeurl/-/encodeurl-1.0.2.tgz",
+ "integrity": "sha512-TPJXq8JqFaVYm2CWmPvnP2Iyo4ZSM7/QKcSmuMLDObfpH5fi7RUGmd/rTDf+rut/saiDiQEeVTNgAmJEdAOx0w==",
+ "dev": true,
+ "engines": {
+ "node": ">= 0.8"
+ }
+ },
"node_modules/send/node_modules/ms": {
"version": "2.1.3",
"resolved": "https://registry.npmjs.org/ms/-/ms-2.1.3.tgz",
@@ -15638,15 +15650,15 @@
}
},
"node_modules/serve-static": {
- "version": "1.15.0",
- "resolved": "https://registry.npmjs.org/serve-static/-/serve-static-1.15.0.tgz",
- "integrity": "sha512-XGuRDNjXUijsUL0vl6nSD7cwURuzEgglbOaFuZM9g3kwDXOWVTck0jLzjPzGD+TazWbboZYu52/9/XPdUgne9g==",
+ "version": "1.16.2",
+ "resolved": "https://registry.npmjs.org/serve-static/-/serve-static-1.16.2.tgz",
+ "integrity": "sha512-VqpjJZKadQB/PEbEwvFdO43Ax5dFBZ2UECszz8bQ7pi7wt//PWe1P6MN7eCnjsatYtBT6EuiClbjSWP2WrIoTw==",
"dev": true,
"dependencies": {
- "encodeurl": "~1.0.2",
+ "encodeurl": "~2.0.0",
"escape-html": "~1.0.3",
"parseurl": "~1.3.3",
- "send": "0.18.0"
+ "send": "0.19.0"
},
"engines": {
"node": ">= 0.8.0"
diff --git a/samplesheets/vueapp/package.json b/samplesheets/vueapp/package.json
index 1acb3387..e1f003c5 100644
--- a/samplesheets/vueapp/package.json
+++ b/samplesheets/vueapp/package.json
@@ -1,6 +1,6 @@
{
"name": "samplesheets",
- "version": "0.15.1",
+ "version": "1.0.0-WIP",
"private": true,
"scripts": {
"serve": "vue-cli-service serve",