diff --git a/recipes/minnow/build.sh b/recipes/minnow/build.sh new file mode 100644 index 0000000000000..089e85b85a33e --- /dev/null +++ b/recipes/minnow/build.sh @@ -0,0 +1,20 @@ +#!/bin/bash + +export CFLAGS="-I$PREFIX/include" +#export LDFLAGS="-L$PREFIX/lib" + +export CPATH=${PREFIX}/include + + +mkdir -p $PREFIX/bin +mkdir -p $PREFIX/lib + +mkdir -p build +cd build +cmake .. +make +cp src/minnow $PREFIX/bin/ +cp src/fixfasta $PREFIX/bin/ + +cp src/libfixfastalib.a $PREFIX/lib/ +cp src/libminnowlib.a $PREFIX/lib/ diff --git a/recipes/minnow/meta.yaml b/recipes/minnow/meta.yaml new file mode 100644 index 0000000000000..95851b38de309 --- /dev/null +++ b/recipes/minnow/meta.yaml @@ -0,0 +1,40 @@ +{% set version="master" %} + +build: + number: 0 + +about: + home: https://github.com/COMBINE-lab/minnow + license: GPLv3 + summary: A principled framework for rapid simulation of dscRNA-seq data at the read level + +package: + name: minnow + version: {{ version }} + +source: + url: https://github.com/COMBINE-lab/minnow/archive/{{ version }}.tar.gz + # work on develop until everything compiles cleanly + #url: https://github.com/COMBINE-lab/salmon/archive/develop.tar.gz + md5: 055ebfaa5ce660df327a28c15ca22f4f + #patches: salmon_cmake.patch + +requirements: + build: + - autoconf + - cmake + - {{ compiler('cxx') }} + - {{ compiler('c') }} + host: + - icu + - zlib + - bzip2 + - unzip + run: + - zlib + - bzip2 + +test: + commands: + - minnow --help +