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When I ran the following command to start cbioportal, I got error below.
How should I solve this issue?
Thanks!
java -jar target/cbioportal-exec.jar
**Binding to target org.cbioportal.properties.PortalProperties$$SpringCGLIB$$0 failed:
Property: .authenticate
Value: "null"
Reason: Value is not valid**
. ____ _ __ _ _
/\\ / ___'_ __ _ _(_)_ __ __ _ \ \ \ \
( ( )\___ | '_ | '_| | '_ \/ _` | \ \ \ \
\\/ ___)| |_)| | | | | || (_| | ) ) ) )
' |____| .__|_| |_|_| |_\__, | / / / /
=========|_|==============|___/=/_/_/_/
:: Spring Boot :: (v3.4.1)
21:35:22.522 [background-preinit] INFO o.h.validator.internal.util.Version - HV000001: Hibernate Validator 8.0.2.Final
21:35:22.561 [main] INFO org.cbioportal.PortalApplication - Starting PortalApplication v6.0.24-SNAPSHOT using Java 21.0.5 with PID 14272 (/home/yang/cbio_portal/cbioportal/target/cbioportal-exec.jar started by yang in /home/yang/cbio_portal/cbioportal)
21:35:22.562 [main] INFO org.cbioportal.PortalApplication - No active profile set, falling back to 1 default profile: "default"
21:35:22.628 [main] INFO o.s.c.i.s.PropertySourceProcessor - Properties location [classpath:security.properties] not resolvable: class path resource [security.properties] cannot be opened because it does not exist
21:35:23.306 [main] INFO o.s.d.r.c.RepositoryConfigurationDelegate - Multiple Spring Data modules found, entering strict repository configuration mode
21:35:23.307 [main] INFO o.s.d.r.c.RepositoryConfigurationDelegate - Bootstrapping Spring Data MongoDB repositories in DEFAULT mode.
21:35:23.333 [main] INFO o.s.d.r.c.RepositoryConfigurationDelegate - Finished Spring Data repository scanning in 21 ms. Found 0 MongoDB repository interfaces.
21:35:23.549 [main] WARN o.s.c.s.PostProcessorRegistrationDelegate$BeanPostProcessorChecker - Bean 'methodValidationConfig' of type [org.cbioportal.web.config.MethodValidationConfig$$SpringCGLIB$$0] is not eligible for getting processed by all BeanPostProcessors (for example: not eligible for auto-proxying). The currently created BeanPostProcessor [methodValidationPostProcessor] is declared through a non-static factory method on that class; consider declaring it as static instead.
21:35:23.557 [main] WARN o.s.c.s.PostProcessorRegistrationDelegate$BeanPostProcessorChecker - Bean 'validatorFactoryBean' of type [org.springframework.validation.beanvalidation.LocalValidatorFactoryBean] is not eligible for getting processed by all BeanPostProcessors (for example: not eligible for auto-proxying). Is this bean getting eagerly injected/applied to a currently created BeanPostProcessor [methodValidationPostProcessor]? Check the corresponding BeanPostProcessor declaration and its dependencies/advisors. If this bean does not have to be post-processed, declare it with ROLE_INFRASTRUCTURE.
21:35:23.855 [main] INFO o.s.b.w.e.tomcat.TomcatWebServer - Tomcat initialized with port 8080 (http)
21:35:23.863 [main] INFO o.a.coyote.http11.Http11NioProtocol - Initializing ProtocolHandler ["http-nio-8080"]
21:35:23.865 [main] INFO o.a.catalina.core.StandardService - Starting service [Tomcat]
21:35:23.865 [main] INFO o.a.catalina.core.StandardEngine - Starting Servlet engine: [Apache Tomcat/10.1.34]
21:35:23.888 [main] INFO o.a.c.c.C.[Tomcat].[localhost].[/] - Initializing Spring embedded WebApplicationContext
21:35:23.889 [main] INFO o.s.b.w.s.c.ServletWebServerApplicationContext - Root WebApplicationContext: initialization completed in 1299 ms
21:35:23.954 [main] INFO o.c.persistence.CacheEnabledConfig - Cache is enabled: false
21:35:23.954 [main] INFO o.c.persistence.CacheEnabledConfig - Cache is enabled for clickhouse: false
Loading class `com.mysql.jdbc.Driver'. This is deprecated. The new driver class is `com.mysql.cj.jdbc.Driver'. The driver is automatically registered via the SPI and manual loading of the driver class is generally unnecessary.
21:35:24.412 [main] WARN o.s.b.w.s.c.AnnotationConfigServletWebServerApplicationContext - Exception encountered during context initialization - cancelling refresh attempt: org.springframework.boot.context.properties.ConfigurationPropertiesBindException: Error creating bean with name 'portalProperties': Could not bind properties to 'PortalProperties' : prefix=, ignoreInvalidFields=false, ignoreUnknownFields=true
21:35:24.414 [main] INFO o.a.catalina.core.StandardService - Stopping service [Tomcat]
21:35:24.436 [main] INFO o.s.b.a.l.ConditionEvaluationReportLogger -
Error starting ApplicationContext. To display the condition evaluation report re-run your application with 'debug' enabled.
21:35:24.444 [main] ERROR o.s.b.d.LoggingFailureAnalysisReporter -
***************************
APPLICATION FAILED TO START
***************************
Description:
Binding to target org.cbioportal.properties.PortalProperties$$SpringCGLIB$$0 failed:
Property: .authenticate
Value: "null"
Reason: Value is not valid
Action:
Update your application's configuration
The text was updated successfully, but these errors were encountered:
When I ran the following command to start cbioportal, I got error below.
How should I solve this issue?
Thanks!
java -jar target/cbioportal-exec.jar
**Binding to target org.cbioportal.properties.PortalProperties$$SpringCGLIB$$0 failed:
The text was updated successfully, but these errors were encountered: