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Work with CDA to understand/help define their needs for ingesting/accessing the model and terminology support #12

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gaurav opened this issue Aug 31, 2020 · 4 comments
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@gaurav
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gaurav commented Aug 31, 2020

I assume this is referring to what I (Laura) should do? Has anything been done yet by anyone on the team? (that is, has anyone talking to CDA about the way they currently do this, what their needs and pain points are?)

@gaurav gaurav added this to the Phase 2 - Quarter 3 milestone Aug 31, 2020
@llchristopherson llchristopherson self-assigned this Sep 2, 2020
@llchristopherson llchristopherson added the question Short, quick info is needed label Sep 2, 2020
@gaurav
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gaurav commented Sep 14, 2020

We're currently meeting with CDA every other Thursday. I think the plan is to design and create a minimum viable product that includes CDA's data and CCDH's data model.

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gaurav commented Oct 13, 2020

We're getting pretty close to the design of an CDA/CCDH v0 MVP. We can probably start work on this once we have a rough draft of CRDC-H in BiolinkML, but I don't think that will be done in time for us to finish this in Q3. I'll therefore push it to Q4.

@balhoff balhoff removed this from the Phase 2 - Quarter 4 (2020) milestone Apr 6, 2021
@gaurav gaurav assigned gaurav and unassigned llchristopherson Jul 6, 2021
@gaurav gaurav added in progress Somebody is working on this right now and removed question Short, quick info is needed labels Jul 6, 2021
@gaurav
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gaurav commented Jul 6, 2021

We now have a usable model and example transformation code, and are working on turning this into an automated test suite (cancerDHC/example-data#8). In the meantime, CDA have created a model based on our model that they plan to update to bring it in sync with CCDH model v1.0.1. So we should probably be having this conversation soon.

@gaurav gaurav added this to the Phase 3 - Quarter 4 (2021) milestone Aug 16, 2021
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gaurav commented Aug 16, 2021

We had initially planned to do this as part of the CCDH Pilot (due Sep 20), but this has now been postponed past that. However, we should figure this out ASAP, so I'm planning to have this done by the end of Phase 3 Quarter 4.

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