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dna.yml
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name: dna
channels:
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- _openmp_mutex=5.1=1_gnu
- asttokens=2.0.5=pyhd3eb1b0_0
- backcall=0.2.0=pyhd3eb1b0_0
- biopython=1.79=py38h497a2fe_1
- blas=1.0=mkl
- brotli=1.0.9=h5eee18b_8
- brotli-bin=1.0.9=h5eee18b_8
- bzip2=1.0.8=h5eee18b_6
- ca-certificates=2024.7.2=h06a4308_0
- comm=0.2.1=py38h06a4308_0
- contourpy=1.0.5=py38hdb19cb5_0
- cycler=0.11.0=pyhd3eb1b0_0
- cyrus-sasl=2.1.28=h52b45da_1
- dbus=1.13.18=hb2f20db_0
- debugpy=1.6.7=py38h6a678d5_0
- decorator=5.1.1=pyhd3eb1b0_0
- executing=0.8.3=pyhd3eb1b0_0
- expat=2.6.3=h6a678d5_0
- fontconfig=2.14.1=h55d465d_3
- fonttools=4.51.0=py38h5eee18b_0
- freetype=2.12.1=h4a9f257_0
- glib=2.78.4=h6a678d5_0
- glib-tools=2.78.4=h6a678d5_0
- gst-plugins-base=1.14.1=h6a678d5_1
- gstreamer=1.14.1=h5eee18b_1
- icu=73.1=h6a678d5_0
- importlib_metadata=7.0.1=hd3eb1b0_0
- importlib_resources=6.4.0=py38h06a4308_0
- intel-openmp=2023.1.0=hdb19cb5_46306
- ipykernel=6.29.5=pyh3099207_0
- ipython=8.12.2=py38h06a4308_0
- jedi=0.19.1=py38h06a4308_0
- jpeg=9e=h5eee18b_3
- jupyter_client=8.6.0=py38h06a4308_0
- jupyter_core=5.7.2=py38h06a4308_0
- kiwisolver=1.4.4=py38h6a678d5_0
- krb5=1.20.1=h143b758_1
- lcms2=2.12=h3be6417_0
- ld_impl_linux-64=2.38=h1181459_1
- lerc=3.0=h295c915_0
- libbrotlicommon=1.0.9=h5eee18b_8
- libbrotlidec=1.0.9=h5eee18b_8
- libbrotlienc=1.0.9=h5eee18b_8
- libclang=14.0.6=default_hc6dbbc7_1
- libclang13=14.0.6=default_he11475f_1
- libcups=2.4.2=h2d74bed_1
- libdeflate=1.17=h5eee18b_1
- libedit=3.1.20230828=h5eee18b_0
- libffi=3.4.4=h6a678d5_1
- libgcc-ng=11.2.0=h1234567_1
- libglib=2.78.4=hdc74915_0
- libgomp=11.2.0=h1234567_1
- libiconv=1.16=h5eee18b_3
- libllvm14=14.0.6=hdb19cb5_3
- libpng=1.6.39=h5eee18b_0
- libpq=12.17=hdbd6064_0
- libsodium=1.0.18=h7b6447c_0
- libstdcxx-ng=11.2.0=h1234567_1
- libtiff=4.5.1=h6a678d5_0
- libuuid=1.41.5=h5eee18b_0
- libwebp-base=1.3.2=h5eee18b_0
- libxcb=1.15=h7f8727e_0
- libxkbcommon=1.0.1=h097e994_2
- libxml2=2.13.1=hfdd30dd_2
- lz4-c=1.9.4=h6a678d5_1
- matplotlib=3.7.2=py38h578d9bd_0
- matplotlib-base=3.7.2=py38h1128e8f_0
- matplotlib-inline=0.1.6=py38h06a4308_0
- mkl=2023.1.0=h213fc3f_46344
- mkl-service=2.4.0=py38h5eee18b_1
- mkl_fft=1.3.8=py38h5eee18b_0
- mkl_random=1.2.4=py38hdb19cb5_0
- mysql=5.7.24=h721c034_2
- ncurses=6.4=h6a678d5_0
- nest-asyncio=1.6.0=py38h06a4308_0
- numpy-base=1.24.3=py38h060ed82_1
- openjpeg=2.5.2=he7f1fd0_0
- openssl=3.0.15=h5eee18b_0
- packaging=24.1=py38h06a4308_0
- parso=0.8.3=pyhd3eb1b0_0
- pcre2=10.42=hebb0a14_1
- pexpect=4.8.0=pyhd3eb1b0_3
- pickleshare=0.7.5=pyhd3eb1b0_1003
- pillow=10.4.0=py38h5eee18b_0
- pip=24.2=py38h06a4308_0
- platformdirs=3.10.0=py38h06a4308_0
- ply=3.11=py38_0
- prompt-toolkit=3.0.43=py38h06a4308_0
- ptyprocess=0.7.0=pyhd3eb1b0_2
- pure_eval=0.2.2=pyhd3eb1b0_0
- pygments=2.15.1=py38h06a4308_1
- pyparsing=3.0.9=py38h06a4308_0
- pyqt=5.15.10=py38h6a678d5_0
- pyqt5-sip=12.13.0=py38h5eee18b_0
- python=3.8.19=h955ad1f_0
- python-dateutil=2.9.0post0=py38h06a4308_2
- python_abi=3.8=2_cp38
- pyzmq=25.1.2=py38h6a678d5_0
- qt-main=5.15.2=h53bd1ea_10
- readline=8.2=h5eee18b_0
- setuptools=72.1.0=py38h06a4308_0
- sip=6.7.12=py38h6a678d5_0
- six=1.16.0=pyhd3eb1b0_1
- sqlite=3.45.3=h5eee18b_0
- stack_data=0.2.0=pyhd3eb1b0_0
- tbb=2021.8.0=hdb19cb5_0
- tk=8.6.14=h39e8969_0
- tomli=2.0.1=py38h06a4308_0
- tornado=6.4.1=py38h5eee18b_0
- traitlets=5.14.3=py38h06a4308_0
- typing_extensions=4.11.0=py38h06a4308_0
- unicodedata2=15.1.0=py38h5eee18b_0
- wcwidth=0.2.5=pyhd3eb1b0_0
- wheel=0.44.0=py38h06a4308_0
- xz=5.4.6=h5eee18b_1
- zeromq=4.3.5=h6a678d5_0
- zlib=1.2.13=h5eee18b_1
- zstd=1.5.5=hc292b87_2
- pip:
- accelerate==0.33.0
- aiohappyeyeballs==2.4.0
- aiohttp==3.10.5
- aiosignal==1.3.1
- antlr4-python3-runtime==4.9.3
- async-timeout==4.0.3
- attrs==24.2.0
- blinker==1.8.2
- cdis-pipe-utils==0.23
- certifi==2024.8.30
- charset-normalizer==3.3.2
- click==8.1.7
- cmake==3.30.2
- datasets==2.21.0
- dill==0.3.8
- einops==0.8.0
- evaluate==0.4.2
- filelock==3.15.4
- flask==3.0.3
- flask-cors==5.0.0
- frozenlist==1.4.1
- fsspec==2024.6.1
- greenlet==3.1.0
- huggingface-hub==0.24.6
- idna==3.8
- importlib-metadata==8.5.0
- itsdangerous==2.2.0
- jinja2==3.1.4
- lit==18.1.8
- markupsafe==2.1.5
- mpmath==1.3.0
- multidict==6.0.5
- multiprocess==0.70.16
- networkx==3.1
- numpy==1.24.4
- nvidia-cublas-cu11==11.10.3.66
- nvidia-cublas-cu12==12.1.3.1
- nvidia-cuda-cupti-cu11==11.7.101
- nvidia-cuda-cupti-cu12==12.1.105
- nvidia-cuda-nvrtc-cu11==11.7.99
- nvidia-cuda-nvrtc-cu12==12.1.105
- nvidia-cuda-runtime-cu11==11.7.99
- nvidia-cuda-runtime-cu12==12.1.105
- nvidia-cudnn-cu11==8.5.0.96
- nvidia-cudnn-cu12==9.1.0.70
- nvidia-cufft-cu11==10.9.0.58
- nvidia-cufft-cu12==11.0.2.54
- nvidia-curand-cu11==10.2.10.91
- nvidia-curand-cu12==10.3.2.106
- nvidia-cusolver-cu11==11.4.0.1
- nvidia-cusolver-cu12==11.4.5.107
- nvidia-cusparse-cu11==11.7.4.91
- nvidia-cusparse-cu12==12.1.0.106
- nvidia-nccl-cu11==2.14.3
- nvidia-nccl-cu12==2.20.5
- nvidia-nvjitlink-cu12==12.6.68
- nvidia-nvtx-cu11==11.7.91
- nvidia-nvtx-cu12==12.1.105
- omegaconf==2.3.0
- pandas==2.0.3
- peft==0.12.0
- psutil==6.0.0
- psycopg2==2.9.9
- pyarrow==17.0.0
- pysam==0.22.1
- python-igraph==0.11.6
- pytz==2024.1
- pyyaml==6.0.2
- regex==2024.7.24
- requests==2.32.3
- safetensors==0.4.4
- samtools-tool==0.15
- scipy==1.10.1
- sqlalchemy==2.0.34
- sympy==1.13.2
- texttable==1.7.0
- tokenizers==0.19.1
- torch==1.13.1
- tqdm==4.66.5
- transformers==4.44.2
- tzdata==2024.1
- urllib3==2.2.2
- werkzeug==3.0.4
- xxhash==3.5.0
- yarl==1.9.6
- zipp==3.20.1
prefix: /home/cxo147/anaconda3/envs/dna