You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
James proposes implementation of a new widget with tabular display where rows correspond to pipeline inputs and columns correspond to run ordering, or vice versa. Any complicated batch configuration should be done with the restful API. If there are N runs, each input must either have N entries or 1 entry that is replicated across runs.
ArtPoon
changed the title
Batch execution of pipeline on a set of inputs
Allow user to select multiple data sets for batch execution through UI
Sep 28, 2015
The plan is to use DataSet filtering to populate columns in a table that correspond to pipeline inputs. User selects groups (or single) DataSets for each pipeline input in the order of those inputs. Table rows are automatically propagated with combinations of DataSets up to the length of the largest group (see above comment).
For example, executing the mixed HCV pipeline on a MiSeq run's worth of paired FASTQ files.
The text was updated successfully, but these errors were encountered: