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I’d like to request a feature for bids2table that allows the CLI to accept file paths via standard input (stdin) instead of requiring a root directory. This would make it easier to work with file paths from various sources like cloud storage or environments where direct access to the entire directory is limited.
Examples:
Cloud storage:
aws s3 ls s3://my-bids-dataset/ --recursive | awk '{print $4}'| bids2table
Integration with other tools:
find /my/data -type f -name "*.nii.gz"| bids2table
Hi,
I’d like to request a feature for
bids2table
that allows the CLI to accept file paths via standard input (stdin) instead of requiring a root directory. This would make it easier to work with file paths from various sources like cloud storage or environments where direct access to the entire directory is limited.Examples:
Cloud storage:
Integration with other tools:
From a file:
cat bids_file_paths.txt | bids2table
Limited access:
Let me know what you think!
Thanks!
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