Error in Exp[G, ] : subscript out of bounds

[DongqiangZeng0808]

Dear author of BLCAsubtyping,

It's really an excellent classifier for BLCA. Recently, we have a problem running this function.
I am looking forward to hearing from you.

cl <- classify(expMat = as.matrix(eset),

•            symbol = "Gene.Symbol",
  

•            classification.systems = c("Baylor", "UNC", "MDA", "CIT", "Lund", "TCGA"))
  

predicting Baylor subtypes...Error in Exp[G, ] : subscript out of bounds

summary(rownames(eset)%in%rownames(cit))
Mode FALSE TRUE
logical 7418 18712
summary(rownames(cit)%in%rownames(eset))
Mode FALSE TRUE
logical 4440 18712

[DR-Lemontea]

You can try to convert the data format.
cl <- classify(expMat = as.data.frame(eset)

[orange511]

You can try to convert the data format. cl <- classify(expMat = as.data.frame(eset)

the eset must be a matrix, buddy