From b841fdc37e3310f44682531adec7be719bc854f8 Mon Sep 17 00:00:00 2001
From: Andrew Gilbert <andrew.gilbert@cern.ch>
Date: Sat, 30 May 2015 17:06:04 +0200
Subject: [PATCH] adding CombineHarvester tH analysis example script

---
 .../CombineTools/scripts/setup-tH.py          | 116 ++++++++++++++++++
 1 file changed, 116 insertions(+)
 create mode 100755 CombineHarvester/CombineTools/scripts/setup-tH.py

diff --git a/CombineHarvester/CombineTools/scripts/setup-tH.py b/CombineHarvester/CombineTools/scripts/setup-tH.py
new file mode 100755
index 00000000..9d50df62
--- /dev/null
+++ b/CombineHarvester/CombineTools/scripts/setup-tH.py
@@ -0,0 +1,116 @@
+#!/usr/bin/env python
+
+import combineharvester as ch
+import os
+
+cb = ch.CombineHarvester()
+
+auxiliaries  = os.environ['CMSSW_BASE'] + '/src/auxiliaries/'
+aux_shapes   = auxiliaries +'shapes/'
+
+procs = {
+  'sig'  : ['tH_YtMinus', 'tHW'],
+  'sim'  : ['WZ', 'ZZ', 'ttW', 'ttZ', 'ttH'],
+  'bkg'  : ['WZ','ZZ','ttW','ttZ','ttH','reducible']
+}
+
+cats = [(0, 'emt'), (1, 'mmt')]
+
+masses = ['125']
+
+cb.AddObservations(   ['*'], ['htt'], ["8TeV"], ['th'],               cats         )
+cb.AddProcesses(      ['*'], ['htt'], ["8TeV"], ['th'], procs['bkg'], cats, False  )
+cb.AddProcesses(     masses, ['htt'], ["8TeV"], ['th'], procs['sig'], cats, True   )
+
+print '>> Adding systematic uncertainties...'
+
+cb.cp().process(procs['sig'] + procs['sim']).AddSyst(
+    cb, 'lumi_$ERA', 'lnN', ch.SystMap()(1.026))
+
+cb.cp().process(procs['sig']).AddSyst(
+    cb, 'CMS_th_sig_trigger_$BIN_$ERA', 'lnN', ch.SystMap('bin')(['emt'], 1.05)(['mmt'], 1.06))
+
+cb.cp().process(procs['sig'] + procs['sim']).AddSyst(
+    cb, 'CMS_th_eff_e_$ERA', 'lnN', ch.SystMap('bin')(['emt'], 1.051))
+
+cb.cp().process(procs['sig'] + procs['sim']).AddSyst(
+    cb, 'CMS_th_eff_m_$ERA', 'lnN', ch.SystMap('bin')(['emt'], 1.051)(['mmt'], 1.102))
+
+cb.cp().process(procs['sig'] + procs['sim']).AddSyst(
+    cb, 'CMS_th_eff_t_$ERA', 'lnN', ch.SystMap()(1.06))
+
+cb.cp().process(procs['sig'] + procs['sim']).AddSyst(
+    cb, 'CMS_th_scale_t_$ERA', 'lnN', ch.SystMap()(1.03))
+
+cb.cp().process(procs['sig'] + ['ttW', 'ttH', 'ZZ', 'WZ']).AddSyst(
+    cb, 'CMS_scale_j_$ERA', 'lnN', ch.SystMap()(1.01))
+
+cb.cp().AddSyst(
+    cb, 'CMS_th_mc_stats_$PROCESS_$BIN_$ERA', 'lnN', ch.SystMap('bin', 'process')
+      (['emt'], ['ttZ'], 1.18)
+      (['emt'], ['ttW'], 1.14)
+      (['emt'], ['ttH'], 1.06)
+      (['emt'], ['ZZ'],  1.10)
+      (['emt'], ['WZ'],  1.12)
+      (['mmt'], ['ttZ'], 1.27)
+      (['mmt'], ['ttW'], 1.18)
+      (['mmt'], ['ttH'], 1.09)
+      (['mmt'], ['ZZ'],  1.15)
+      (['mmt'], ['WZ'],  1.18))
+
+cb.cp().AddSyst(
+    cb, 'CMS_eff_b_$ERA', 'lnN', ch.SystMap('process')
+      (procs['sig'],           1.05)
+      (['ttH', 'ttW', 'ttZ'],  1.03))
+
+cb.cp().AddSyst(
+    cb, 'CMS_fake_b_$ERA', 'lnN', ch.SystMap('process')
+      (['WZ', 'ZZ'],           1.20))
+
+cb.cp().process(['reducible']).AddSyst(
+    cb, 'CMS_th_reducible_$BIN_$ERA', 'lnN', ch.SystMap('bin')
+      (['emt'], 1.50)(['mmt'], 1.50))
+
+cb.cp().process(procs['sig']).AddSyst(cb, 'QCDscale_tHq', 'lnN', ch.SystMap()(1.019))
+cb.cp().process(['ttH']).AddSyst(cb, 'QCDscale_ttH', 'lnN', ch.SystMap()(1.067))
+cb.cp().process(['ttW']).AddSyst(cb, 'QCDscale_ttW', 'lnN', ch.SystMap()(1.105))
+cb.cp().process(['ttZ']).AddSyst(cb, 'QCDscale_ttW', 'lnN', ch.SystMap()(1.116))
+cb.cp().process(['WW', 'ZZ']).AddSyst(cb, 'QCDscale_VV', 'lnN', ch.SystMap()(1.036))
+
+cb.cp().AddSyst(
+    cb, 'pdf_gg', 'lnN', ch.SystMap('process')
+      (['ttZ'], 0.919)(['ttH'], 0.926))
+
+cb.cp().AddSyst(
+    cb, 'pdf_qqbar', 'lnN', ch.SystMap('process')
+      (['tH_YtMinus'], 1.048)(['ttW'], 1.072)(['WZ','ZZ'], 1.040))
+
+cb.cp().AddSyst(
+    cb, 'pdf_qg', 'lnN', ch.SystMap('process')
+      (['tHW'], 1.048))
+
+
+print '>> Extracting histograms from input root files...'
+file = aux_shapes + 'CERN/htt_th.inputs-sm-8TeV.root'
+cb.cp().backgrounds().ExtractShapes(
+    file, '$BIN/$PROCESS', '$BIN/$PROCESS_$SYSTEMATIC')
+cb.cp().signals().ExtractShapes(
+    file, '$BIN/$PROCESS$MASS', '$BIN/$PROCESS$MASS_$SYSTEMATIC')
+
+
+print '>> Generating bbb uncertainties...'
+bbb = ch.BinByBinFactory()
+bbb.SetAddThreshold(0.1).SetFixNorm(True)
+bbb.AddBinByBin(cb.cp().process(['reducible']), cb)
+
+
+print '>> Setting standardised bin names...'
+ch.SetStandardBinNames(cb)
+cb.PrintAll()
+
+writer = ch.CardWriter('$TAG/$MASS/$ANALYSIS_$CHANNEL_$BINID_$ERA.txt',
+                       '$TAG/common/$ANALYSIS_$CHANNEL.input.root')
+writer.SetVerbosity(1)
+writer.WriteCards('output/sm_cards/LIMITS', cb)
+
+print '>> Done!'
\ No newline at end of file