NAMESPACE

# Generated by roxygen2: do not edit by hand

S3method(print,SoupChannel)
export(SoupChannel)
export(adjustCounts)
export(autoEstCont)
export(calculateContaminationFraction)
export(estimateNonExpressingCells)
export(estimateSoup)
export(load10X)
export(plotChangeMap)
export(plotMarkerDistribution)
export(plotMarkerMap)
export(quickMarkers)
export(setClusters)
export(setContaminationFraction)
export(setDR)
export(setSoupProfile)
import(ggplot2)
importFrom(Matrix,Matrix)
importFrom(Matrix,colSums)
importFrom(Matrix,rowSums)
importFrom(Matrix,sparseMatrix)
importFrom(Matrix,t)
importFrom(Seurat,Read10X)
importFrom(grDevices,rainbow)
importFrom(graphics,abline)
importFrom(graphics,legend)
importFrom(graphics,lines)
importFrom(graphics,plot)
importFrom(methods,as)
importFrom(methods,is)
importFrom(stats,approx)
importFrom(stats,coef)
importFrom(stats,confint)
importFrom(stats,dgamma)
importFrom(stats,dpois)
importFrom(stats,glm)
importFrom(stats,lowess)
importFrom(stats,optimise)
importFrom(stats,p.adjust)
importFrom(stats,pbinom)
importFrom(stats,pchisq)
importFrom(stats,phyper)
importFrom(stats,poisson)
importFrom(stats,ppois)
importFrom(stats,qbeta)
importFrom(stats,qgamma)
importFrom(stats,quantile)
importFrom(stats,rbinom)
importFrom(stats,setNames)
importFrom(stats,spline)
importFrom(utils,data)
importFrom(utils,head)
importFrom(utils,read.csv)
importFrom(utils,read.delim)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)