diff --git a/dev.Dockerfile b/dev.Dockerfile index 348ef521..82c3ef49 100644 --- a/dev.Dockerfile +++ b/dev.Dockerfile @@ -6,8 +6,7 @@ RUN apt-get update -y && \ apt-get install -y libpq-dev && \ apt-get install -y gcc && \ apt-get install -y wget && \ - apt-get install -y libcurl4 && \ - apt-get install build-essential -y # cpp compiler required for hsnwlib + apt-get install -y libcurl4 RUN pip install --upgrade pip RUN pip install https://github.com/pepkit/pipestat/archive/refs/heads/dev.zip @@ -17,10 +16,6 @@ RUN wget http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bigBedToBed -P /u RUN wget http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedIntersect -P /usr/local/bin RUN chmod 755 /usr/local/bin/bigBedToBed /usr/local/bin/bedIntersect -COPY geniml /geniml -RUN pip install /geniml -RUN pip install gtokenizers - COPY . /app RUN pip install -r requirements/requirements-all.txt RUN pip install -r requirements/requirements-dev.txt