From 8ea6d61d1687d820d1ed9672c90d224e4f40cb8b Mon Sep 17 00:00:00 2001
From: Ankit Bhandekar <83757805+bewithankit@users.noreply.github.com>
Date: Tue, 13 Jun 2023 17:05:58 +0100
Subject: [PATCH 01/23] Add logo
---
docs/source/images/logo.svg | 6984 +++++++++++++++++++++++++++++++++++
1 file changed, 6984 insertions(+)
create mode 100644 docs/source/images/logo.svg
diff --git a/docs/source/images/logo.svg b/docs/source/images/logo.svg
new file mode 100644
index 0000000000..a613359039
--- /dev/null
+++ b/docs/source/images/logo.svg
@@ -0,0 +1,6984 @@
+
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From 29cd0f94e52248b2d5833fba58f0182f5a1a5be8 Mon Sep 17 00:00:00 2001
From: Ankit Bhandekar <83757805+bewithankit@users.noreply.github.com>
Date: Tue, 13 Jun 2023 17:10:05 +0100
Subject: [PATCH 02/23] Update conf.py
---
docs/source/conf.py | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/docs/source/conf.py b/docs/source/conf.py
index 2d2fea1b0d..343635cfcd 100755
--- a/docs/source/conf.py
+++ b/docs/source/conf.py
@@ -303,12 +303,12 @@ def _get_date():
# The name of an image file (relative to this directory) to place at
# the top of the sidebar.
-# html_logo = None
+html_logo = "images/logo.png"
# The name of an image file (within the static path) to use as favicon
# of the docs. This file should be a Windows icon file (.ico) being
# 16x16 or 32x32 pixels large.
-# html_favicon = None
+html_favicon = "_static/favicon.ico"
# Add any paths that contain custom static files (such as style
# sheets) here, relative to this directory. They are copied after the
From 82fc02e03712be354d2e3b4c822a566532ab360c Mon Sep 17 00:00:00 2001
From: Ankit Bhandekar <83757805+bewithankit@users.noreply.github.com>
Date: Tue, 13 Jun 2023 17:12:38 +0100
Subject: [PATCH 03/23] Add favicon
---
docs/source/_static/favicon.ico | Bin 0 -> 2040 bytes
1 file changed, 0 insertions(+), 0 deletions(-)
create mode 100644 docs/source/_static/favicon.ico
diff --git a/docs/source/_static/favicon.ico b/docs/source/_static/favicon.ico
new file mode 100644
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Date: Wed, 21 Jun 2023 15:10:26 +0100
Subject: [PATCH 04/23] Updated logo
---
docs/source/images/logo.svg | 25596 ++++++++++++++++++++++++++++++++--
1 file changed, 24487 insertions(+), 1109 deletions(-)
diff --git a/docs/source/images/logo.svg b/docs/source/images/logo.svg
index a613359039..67c97597f7 100644
--- a/docs/source/images/logo.svg
+++ b/docs/source/images/logo.svg
@@ -8,12 +8,13 @@
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id="svg5"
inkscape:version="1.1.2 (0a00cf5339, 2022-02-04)"
- sodipodi:docname="logo_final_500px.svg"
+ sodipodi:docname="cf-python_Bryan4.svg"
inkscape:export-filename="/home/ankit/Documents/logo/logo_final.jpg"
inkscape:export-xdpi="96"
inkscape:export-ydpi="96"
xmlns:inkscape="http://www.inkscape.org/namespaces/inkscape"
xmlns:sodipodi="http://sodipodi.sourceforge.net/DTD/sodipodi-0.dtd"
+ xmlns:xlink="http://www.w3.org/1999/xlink"
xmlns="http://www.w3.org/2000/svg"
xmlns:svg="http://www.w3.org/2000/svg">
+ width="500px"
+ inkscape:snap-global="true">
@@ -5845,1140 +5847,24516 @@
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+ clip-path="url(#p472204e74d-6)"
+ style="fill:none;stroke:#000000;stroke-width:1.5"
+ id="path29441-8" />
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+ clip-path="url(#p472204e74d-6)"
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+ clip-path="url(#p472204e74d-6)"
+ style="fill:none;stroke:#000000;stroke-width:1.5"
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+ clip-path="url(#p472204e74d-6)"
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+ clip-path="url(#p472204e74d-6)"
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+ style="fill:none;stroke:#000000;stroke-width:1.50342;stroke-linejoin:miter;stroke-miterlimit:4;stroke-dasharray:none"
+ id="path29802-4" />
+
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+
+ id="circle2466"
+ style="color:#000000;opacity:1;fill:#004d1f;stroke-width:0.862473;stroke-linejoin:round;-inkscape-stroke:none"
+ d="M 77.643838,30.429668 C 59.360389,24.489633 39.223502,33.540144 31.726745,51.594784 25.210091,67.289018 30.25513,84.94579 42.92606,95.04691 l 2.673739,-4.976439 C 35.359599,81.389642 31.422832,66.80532 36.854598,53.723852 43.125691,38.621006 59.630283,30.948468 74.965967,35.413341 Z" />
-
From 6c6c562312552fe84a873cd8d5f3f13fd077e5a5 Mon Sep 17 00:00:00 2001
From: David Hassell
Date: Fri, 25 Aug 2023 23:00:45 +0100
Subject: [PATCH 05/23] dev
---
cf/read_write/netcdf/netcdfwrite.py | 23 +++++++++++++++++++++++
1 file changed, 23 insertions(+)
diff --git a/cf/read_write/netcdf/netcdfwrite.py b/cf/read_write/netcdf/netcdfwrite.py
index 9690bf5227..936bf47d75 100644
--- a/cf/read_write/netcdf/netcdfwrite.py
+++ b/cf/read_write/netcdf/netcdfwrite.py
@@ -22,6 +22,29 @@ def __new__(cls, *args, **kwargs):
instance._NetCDFRead = NetCDFRead
return instance
+ def _nc_is_unlimited_axis(self, field, axis):
+ """Whether an axis is unlimited.
+
+ .. versionadded:: TODOUNLIMITED
+
+ :Parameters:
+
+ field: `Field` or `Domain`
+
+ axis: `str`
+
+ :Returns:
+
+ `bool`
+
+ """
+ print (22222)
+ if self.write_vars['cfa']:
+ print (99999999999999999)
+ return False
+
+ return super().implementation.nc_is_unlimited_axis(field, axis)
+
def _write_as_cfa(self, cfvar, construct_type, domain_axes):
"""Whether or not to write as a CFA variable.
From 76920ef75b0ccea3c71293b259387ca260401395 Mon Sep 17 00:00:00 2001
From: David Hassell
Date: Tue, 29 Aug 2023 15:59:56 +0100
Subject: [PATCH 06/23] linting
---
docs/source/conf.py | 1 +
docs/source/recipes/plot_13_recipe.py | 8 ++--
docs/source/recipes/plot_15_recipe.py | 65 ++++++++++++++-------------
3 files changed, 40 insertions(+), 34 deletions(-)
diff --git a/docs/source/conf.py b/docs/source/conf.py
index 36f8d3e5f2..ef96e41443 100755
--- a/docs/source/conf.py
+++ b/docs/source/conf.py
@@ -392,6 +392,7 @@ def _get_date():
}
import warnings
+
warnings.filterwarnings("ignore")
# -- Options for LaTeX output -------------------------------------------------
diff --git a/docs/source/recipes/plot_13_recipe.py b/docs/source/recipes/plot_13_recipe.py
index 4bee45ea71..3fbdf1bf0e 100644
--- a/docs/source/recipes/plot_13_recipe.py
+++ b/docs/source/recipes/plot_13_recipe.py
@@ -182,9 +182,9 @@
# 8. The line for variable ``nino34_anomaly`` calculates the standardized
# anomaly for each time step in the ``nino34_index`` data. It subtracts the
# ``climatology`` from the ``nino34_index`` and then divides by the ``std_dev``.
-# The resulting ``nino34_anomaly`` data represents how much the SST in the NiΓ±o
-# 3.4 region deviates from the 1961-1990 average, in units of standard
-# deviations. This is a common way to quantify climate anomalies like El NiΓ±o
+# The resulting ``nino34_anomaly`` data represents how much the SST in the NiΓ±o
+# 3.4 region deviates from the 1961-1990 average, in units of standard
+# deviations. This is a common way to quantify climate anomalies like El NiΓ±o
# and La NiΓ±a events:
nino34_anomaly = (nino34_index - climatology) / std_dev
@@ -228,7 +228,7 @@
elnino = nino34_rolling >= 0.4
lanina = nino34_rolling <= -0.4
-cfp.gset(xmin='1940-1-1', xmax='2022-12-31', ymin=-3, ymax=3)
+cfp.gset(xmin="1940-1-1", xmax="2022-12-31", ymin=-3, ymax=3)
cfp.gopen(figsize=(10, 6))
cfp.lineplot(
diff --git a/docs/source/recipes/plot_15_recipe.py b/docs/source/recipes/plot_15_recipe.py
index 3b423ed7b4..11ceb4704c 100644
--- a/docs/source/recipes/plot_15_recipe.py
+++ b/docs/source/recipes/plot_15_recipe.py
@@ -6,29 +6,30 @@
using a land use data file and visualize the data as a histogram. This will help
to understand the proportion of different land use categories in each country.
-The land use data is initially available at a high spatial resolution of
-approximately 100 m, with several flags defined with numbers representing the
-type of land use. Regridding the data to a coarser resolution of approximately
+The land use data is initially available at a high spatial resolution of
+approximately 100 m, with several flags defined with numbers representing the
+type of land use. Regridding the data to a coarser resolution of approximately
25 km would incorrectly represent the flags on the new grids.
-To avoid this, we will resample the data to the coarser resolution by
-aggregating the data within predefined spatial regions or bins. This approach
-will give a dataset where each 25 km grid cell contains a histogram of land use
-flags, as determined by the original 100 m resolution data. It retains the
-original spatial extent of the data while reducing its spatial complexity.
-Regridding, on the other hand, involves interpolating the data onto a new grid,
+To avoid this, we will resample the data to the coarser resolution by
+aggregating the data within predefined spatial regions or bins. This approach
+will give a dataset where each 25 km grid cell contains a histogram of land use
+flags, as determined by the original 100 m resolution data. It retains the
+original spatial extent of the data while reducing its spatial complexity.
+Regridding, on the other hand, involves interpolating the data onto a new grid,
which can introduce artifacts and distortions in the data.
"""
-# %%
-# 1. Import the required libraries. We will use Cartopy's ``shapereader`` to
-# work with shapefiles that define country boundaries:
-import cf
import cartopy.io.shapereader as shpreader
import matplotlib.pyplot as plt
import numpy as np
+# %%
+# 1. Import the required libraries. We will use Cartopy's ``shapereader`` to
+# work with shapefiles that define country boundaries:
+import cf
+
# %%
# 2. Read and select land use data by index and see properties of all constructs:
f = cf.read("~/recipes/output.tif.nc")[0]
@@ -54,6 +55,7 @@
# coordinates with the help of the ``subspace`` function. The subset data is
# stored in the ``f`` variable.
+
def extract_data(country_name):
shpfilename = shpreader.natural_earth(
resolution="10m", category="cultural", name="admin_0_countries"
@@ -71,43 +73,45 @@ def extract_data(country_name):
return f
+
# %%
# 4. Define a function to plot a histogram of land use distribution for a
# specific country:
#
# - The `digitize `_
-# function of the ``cf.Field`` object is called to convert the land use data
-# into indices of bins. It takes an array of bins (defined by
+# function of the ``cf.Field`` object is called to convert the land use data
+# into indices of bins. It takes an array of bins (defined by
# the `np.linspace `_ function)
-# and the ``return_bins=True`` parameter, which returns the actual bin values
+# and the ``return_bins=True`` parameter, which returns the actual bin values
# along with the digitized data.
# - The `np.linspace `_
# function is used to create an array of evenly spaced bin edges from 0 to 50,
# with 51 total values. This creates bins of width 1.
-# - The ``digitized`` variable contains the bin indices for each data point,
+# - The ``digitized`` variable contains the bin indices for each data point,
# while the bins variable contains the actual bin values.
-# - The `cf.histogram `_
-# function is called on the digitized data to create a histogram. This
+# - The `cf.histogram `_
+# function is called on the digitized data to create a histogram. This
# function returns a field object with the histogram data.
# - The `squeeze `_
# function applied to the histogram ``array`` extracts the histogram data as a NumPy
# array and removes any single dimensions.
-# - The ``total_valid_sub_cells`` variable calculates the total number of valid
+# - The ``total_valid_sub_cells`` variable calculates the total number of valid
# subcells (non-missing data points) by summing the histogram data.
-# - The last element of the bin_counts array is removed with slicing
+# - The last element of the bin_counts array is removed with slicing
# (``bin_counts[:-1]``) to match the length of the ``bin_indices`` array.
-# - The ``percentages`` variable calculates the percentage of each bin by
+# - The ``percentages`` variable calculates the percentage of each bin by
# dividing the ``bin_counts`` by the ``total_valid_sub_cells`` and multiplying
# by 100.
-# - The ``bin_indices`` variable calculates the center of each bin by averaging
-# the bin edges. This is done by adding the ``bins.array[:-1, 0]`` and
+# - The ``bin_indices`` variable calculates the center of each bin by averaging
+# the bin edges. This is done by adding the ``bins.array[:-1, 0]`` and
# ``bins.array[1:, 0]`` arrays and dividing by 2.
-# - The ``ax.bar`` function is called to plot the histogram as a bar chart on
+# - The ``ax.bar`` function is called to plot the histogram as a bar chart on
# the provided axis. The x-axis values are given by the ``bin_indices`` array,
# and the y-axis values are given by the ``percentages`` array.
-# - The title, x-axis label, y-axis label, and axis limits are set based on the
+# - The title, x-axis label, y-axis label, and axis limits are set based on the
# input parameters.
+
def plot_histogram(field, ax, label, ylim, xlim):
digitized, bins = field.digitize(np.linspace(0, 50, 51), return_bins=True)
@@ -129,6 +133,7 @@ def plot_histogram(field, ax, label, ylim, xlim):
ax.set_ylim(ylim)
ax.set_xlim(xlim)
+
# %%
# 5. Define the countries of interest:
countries = ["Ireland", "Belgium", "Switzerland"]
@@ -136,14 +141,14 @@ def plot_histogram(field, ax, label, ylim, xlim):
# %%
# 6. Set up the figure and axes for plotting the histograms:
#
-# - The ``plt.subplots`` function is called to set up a figure with three
+# - The ``plt.subplots`` function is called to set up a figure with three
# subplots, with a figure size of 8 inches by 10 inches.
-# - A loop iterates over each country in the countries list and for each
-# country, the ``extract_data`` function is called to extract its land use
+# - A loop iterates over each country in the countries list and for each
+# country, the ``extract_data`` function is called to extract its land use
# data.
# - The ``plot_histogram`` function is then called to plot the histogram of land
# use distribution on the corresponding subplot.
-# - The ``plt.tight_layout`` function is called to ensure that the subplots are
+# - The ``plt.tight_layout`` function is called to ensure that the subplots are
# properly spaced within the figure and finally, the ``plt.show`` function
# displays the figure with the histograms.
fig, axs = plt.subplots(3, 1, figsize=(8, 10))
From 225e439642e038bf5fe6c83dab88996d771a4d8f Mon Sep 17 00:00:00 2001
From: David Hassell
Date: Tue, 29 Aug 2023 17:06:02 +0100
Subject: [PATCH 07/23] dev
---
cf/read_write/netcdf/netcdfwrite.py | 15 +++++++++------
cf/test/test_CFA.py | 15 +++++++++++++--
docs/source/recipes/plot_12_recipe.py | 22 +++++++++++-----------
3 files changed, 33 insertions(+), 19 deletions(-)
diff --git a/cf/read_write/netcdf/netcdfwrite.py b/cf/read_write/netcdf/netcdfwrite.py
index 936bf47d75..7ce0da0aa3 100644
--- a/cf/read_write/netcdf/netcdfwrite.py
+++ b/cf/read_write/netcdf/netcdfwrite.py
@@ -22,9 +22,12 @@ def __new__(cls, *args, **kwargs):
instance._NetCDFRead = NetCDFRead
return instance
- def _nc_is_unlimited_axis(self, field, axis):
+ def _unlimited(self, field, axis):
"""Whether an axis is unlimited.
+ If a CFA-netCDF file is being written then no axis can be
+ unlimited, i.e. `False` is always returned.
+
.. versionadded:: TODOUNLIMITED
:Parameters:
@@ -32,18 +35,18 @@ def _nc_is_unlimited_axis(self, field, axis):
field: `Field` or `Domain`
axis: `str`
+ Domain axis construct identifier,
+ e.g. ``'domainaxis1'``.
:Returns:
`bool`
"""
- print (22222)
- if self.write_vars['cfa']:
- print (99999999999999999)
+ if self.write_vars["cfa"]:
return False
-
- return super().implementation.nc_is_unlimited_axis(field, axis)
+
+ return super()._unlimited(field, axis)
def _write_as_cfa(self, cfvar, construct_type, domain_axes):
"""Whether or not to write as a CFA variable.
diff --git a/cf/test/test_CFA.py b/cf/test/test_CFA.py
index 0fbe4b4996..a8934428bc 100644
--- a/cf/test/test_CFA.py
+++ b/cf/test/test_CFA.py
@@ -435,8 +435,6 @@ def test_CFA_PP(self):
def test_CFA_multiple_files(self):
"""Test storing multiple CFA frgament locations."""
- tmpfile1 = "delme1.nc"
- tmpfile2 = "delme2.nc"
f = cf.example_field(0)
cf.write(f, tmpfile1)
f = cf.read(tmpfile1)[0]
@@ -451,6 +449,19 @@ def test_CFA_multiple_files(self):
self.assertEqual(len(g.data.get_filenames()), 2)
self.assertEqual(len(g.get_filenames()), 3)
+ def test_UUU(self):
+ """Test CFA with unlimited dimensions"""
+ f = cf.example_field(0)
+ d = f.domain_axis("X")
+ d.nc_set_unlimited(True)
+ f.del_construct("X")
+ cf.write(f, tmpfile1)
+ g = cf.read(tmpfile1)
+ cf.write(g, tmpfile2, cfa=True)
+
+ # Check that the CFA file can be read
+ h = cf.read(tmpfile2)
+
if __name__ == "__main__":
print("Run date:", datetime.datetime.now())
diff --git a/docs/source/recipes/plot_12_recipe.py b/docs/source/recipes/plot_12_recipe.py
index a1334ee4ed..9a0af6fc91 100644
--- a/docs/source/recipes/plot_12_recipe.py
+++ b/docs/source/recipes/plot_12_recipe.py
@@ -67,22 +67,22 @@
high = aod.where(mask, cf.masked)
# %%
-# 9. Now plot both the AOD from `high-quality` retrieval and all other retrievals
+# 9. Now plot both the AOD from `high-quality` retrieval and all other retrievals
# using `cfplot.con `_. Here:
#
-# - `cfplot.gopen `_ is used to
-# define the parts of the plot area, specifying that the figure should have
-# 1 row and 2 columns, which is closed by
+# - `cfplot.gopen `_ is used to
+# define the parts of the plot area, specifying that the figure should have
+# 1 row and 2 columns, which is closed by
# `cfplot.gclose `_;
# - `plt.suptitle `_
# is used to add a title for the whole figure;
-# - the subplots for plotting are selected using
-# `cfplot.gpos `_ after which
-# `cfplot.mapset `_ is used to
-# set the map limits and resolution for the subplots;
-# - and as cf-plot stores the plot in a plot object with the name
-# ``cfp.plotvars.plot``, country borders are added using normal
-# `Cartopy operations `_
+# - the subplots for plotting are selected using
+# `cfplot.gpos `_ after which
+# `cfplot.mapset `_ is used to
+# set the map limits and resolution for the subplots;
+# - and as cf-plot stores the plot in a plot object with the name
+# ``cfp.plotvars.plot``, country borders are added using normal
+# `Cartopy operations `_
# on the ``cfp.plotvars.mymap`` object:
import cartopy.feature as cfeature
From eb97ec64a08e5f172a2cbc826bf5013d7fd7fb62 Mon Sep 17 00:00:00 2001
From: Ankit Bhandekar <83757805+bewithankit@users.noreply.github.com>
Date: Wed, 30 Aug 2023 11:58:03 +0100
Subject: [PATCH 08/23] Update DOCUMENTATION.md
---
DOCUMENTATION.md | 3 +++
1 file changed, 3 insertions(+)
diff --git a/DOCUMENTATION.md b/DOCUMENTATION.md
index a4e577b8e0..8f4928c2d6 100644
--- a/DOCUMENTATION.md
+++ b/DOCUMENTATION.md
@@ -8,6 +8,9 @@
sphinxcontrib-spelling==4.3.0
* The `.py` files to generate recipes are stored in `docs/source/recipes/`.
+
+* The netCDF and PP files for generationn of the same are available to download at:
+ https://drive.google.com/drive/folders/1gaMHbV0A37hzQHH_C5oMBWOoxgoQPdCT?usp=sharing
* For every new added recipe, `docs/source/recipes/recipe_list.txt` has to be
edited to include the newly added recipe with its corresponding filters in the
From 0667c5a7a6b453553a4c0bab8d1f1e58428139a0 Mon Sep 17 00:00:00 2001
From: Ankit Bhandekar <83757805+bewithankit@users.noreply.github.com>
Date: Wed, 30 Aug 2023 11:58:27 +0100
Subject: [PATCH 09/23] Update DOCUMENTATION.md
---
DOCUMENTATION.md | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/DOCUMENTATION.md b/DOCUMENTATION.md
index 8f4928c2d6..3528231d2d 100644
--- a/DOCUMENTATION.md
+++ b/DOCUMENTATION.md
@@ -9,7 +9,7 @@
* The `.py` files to generate recipes are stored in `docs/source/recipes/`.
-* The netCDF and PP files for generationn of the same are available to download at:
+* The netCDF and PP files for generation of the same are available to download at:
https://drive.google.com/drive/folders/1gaMHbV0A37hzQHH_C5oMBWOoxgoQPdCT?usp=sharing
* For every new added recipe, `docs/source/recipes/recipe_list.txt` has to be
From c2304815727a9807aa5e8733a384ac9f3e284869 Mon Sep 17 00:00:00 2001
From: David Hassell
Date: Wed, 30 Aug 2023 15:42:54 +0100
Subject: [PATCH 10/23] Prevent unlimited dimensions from being written to CFA
netCDF files
---
Changelog.rst | 8 ++++++++
1 file changed, 8 insertions(+)
diff --git a/Changelog.rst b/Changelog.rst
index ec2cf588ee..948cdc34a0 100644
--- a/Changelog.rst
+++ b/Changelog.rst
@@ -1,6 +1,14 @@
version 3.15.2
--------------
+**2023-08-31**
+
+* Prevent unlimited dimensions from being written to CFA netCDF files
+ (https://github.com/NCAS-CMS/cf-python/issues/689)
+
+*version 3.15.2
+--------------
+
**2023-07-21**
* Performance improvements to `cf.Field.regrids` and
From 46e1e67c7e870b4126c9328cdc3e4f4175ff07a5 Mon Sep 17 00:00:00 2001
From: David Hassell
Date: Wed, 30 Aug 2023 15:43:00 +0100
Subject: [PATCH 11/23] dev
---
cf/test/test_CFA.py | 5 ++++-
1 file changed, 4 insertions(+), 1 deletion(-)
diff --git a/cf/test/test_CFA.py b/cf/test/test_CFA.py
index a8934428bc..6c250c81ae 100644
--- a/cf/test/test_CFA.py
+++ b/cf/test/test_CFA.py
@@ -449,8 +449,10 @@ def test_CFA_multiple_files(self):
self.assertEqual(len(g.data.get_filenames()), 2)
self.assertEqual(len(g.get_filenames()), 3)
- def test_UUU(self):
+ def test_CFA_unlimited_dimension(self):
"""Test CFA with unlimited dimensions"""
+ # Create a CAF file field from a field that has an unlimited
+ # dimension and no metadata constructs spanning that dimension
f = cf.example_field(0)
d = f.domain_axis("X")
d.nc_set_unlimited(True)
@@ -461,6 +463,7 @@ def test_UUU(self):
# Check that the CFA file can be read
h = cf.read(tmpfile2)
+ self.assertEqual(len(h), 1)
if __name__ == "__main__":
From 785041a20a6153c0739e32ff46f6e90e18d7c7cc Mon Sep 17 00:00:00 2001
From: David Hassell
Date: Wed, 30 Aug 2023 15:43:42 +0100
Subject: [PATCH 12/23] typo
---
Changelog.rst | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/Changelog.rst b/Changelog.rst
index 948cdc34a0..c7617f47fd 100644
--- a/Changelog.rst
+++ b/Changelog.rst
@@ -6,7 +6,7 @@ version 3.15.2
* Prevent unlimited dimensions from being written to CFA netCDF files
(https://github.com/NCAS-CMS/cf-python/issues/689)
-*version 3.15.2
+version 3.15.2
--------------
**2023-07-21**
From 9eb9c1c8f4565c7b2548c8e7b2b31b67a9540256 Mon Sep 17 00:00:00 2001
From: David Hassell
Date: Wed, 30 Aug 2023 15:43:53 +0100
Subject: [PATCH 13/23] typo
---
Changelog.rst | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/Changelog.rst b/Changelog.rst
index c7617f47fd..fa2b1b6dea 100644
--- a/Changelog.rst
+++ b/Changelog.rst
@@ -5,7 +5,7 @@ version 3.15.2
* Prevent unlimited dimensions from being written to CFA netCDF files
(https://github.com/NCAS-CMS/cf-python/issues/689)
-
+
version 3.15.2
--------------
From 0bb6ef52851cd8484326178bf8b9146cf54bcb8b Mon Sep 17 00:00:00 2001
From: David Hassell
Date: Wed, 30 Aug 2023 15:44:09 +0100
Subject: [PATCH 14/23] typo
---
Changelog.rst | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/Changelog.rst b/Changelog.rst
index fa2b1b6dea..d9e6a5fc4d 100644
--- a/Changelog.rst
+++ b/Changelog.rst
@@ -1,4 +1,4 @@
-version 3.15.2
+version 3.15.3
--------------
**2023-08-31**
From 7d18350b0922f78d68eae9d2943c1e9de111acb6 Mon Sep 17 00:00:00 2001
From: David Hassell
Date: Wed, 30 Aug 2023 15:44:48 +0100
Subject: [PATCH 15/23] typo
---
cf/test/test_CFA.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/cf/test/test_CFA.py b/cf/test/test_CFA.py
index 6c250c81ae..ef7c7c6750 100644
--- a/cf/test/test_CFA.py
+++ b/cf/test/test_CFA.py
@@ -451,7 +451,7 @@ def test_CFA_multiple_files(self):
def test_CFA_unlimited_dimension(self):
"""Test CFA with unlimited dimensions"""
- # Create a CAF file field from a field that has an unlimited
+ # Create a CAF file from a field that has an unlimited
# dimension and no metadata constructs spanning that dimension
f = cf.example_field(0)
d = f.domain_axis("X")
From 05b690f4dae3a83b798379e8bcfea69fbefb03ca Mon Sep 17 00:00:00 2001
From: David Hassell
Date: Wed, 30 Aug 2023 16:42:42 +0100
Subject: [PATCH 16/23] Change logo to logo.svg
---
docs/source/conf.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/docs/source/conf.py b/docs/source/conf.py
index 7466695f8d..aba9f1b601 100755
--- a/docs/source/conf.py
+++ b/docs/source/conf.py
@@ -306,7 +306,7 @@ def _get_date():
# The name of an image file (relative to this directory) to place at
# the top of the sidebar.
-html_logo = "images/logo.png"
+html_logo = "images/logo.svg"
# The name of an image file (within the static path) to use as favicon
# of the docs. This file should be a Windows icon file (.ico) being
From 83b0718c69f87015a5560b71bc5f169d1ad0bd6a Mon Sep 17 00:00:00 2001
From: David Hassell
Date: Thu, 31 Aug 2023 11:25:53 +0100
Subject: [PATCH 17/23] v3.15.2 documentation
---
docs/2_to_3_changes.html | 6 +-
docs/Changelog.html | 10 +-
docs/_downloads/cf_tutorial_files.zip | Bin 168386 -> 168386 bytes
docs/_downloads/plot_01_recipe.ipynb | 2 +-
docs/_downloads/plot_02_recipe.ipynb | 2 +-
docs/_downloads/plot_03_recipe.ipynb | 2 +-
docs/_downloads/plot_04_recipe.ipynb | 2 +-
docs/_downloads/plot_05_recipe.ipynb | 2 +-
docs/_downloads/plot_06_recipe.ipynb | 2 +-
docs/_downloads/plot_07_recipe.ipynb | 2 +-
docs/_downloads/plot_08_recipe.ipynb | 2 +-
docs/_downloads/plot_09_recipe.ipynb | 2 +-
docs/_downloads/plot_10_recipe.ipynb | 2 +-
docs/_downloads/plot_11_recipe.ipynb | 2 +-
docs/_downloads/plot_12_recipe.ipynb | 2 +-
docs/_downloads/plot_13_recipe.ipynb | 2 +-
docs/_downloads/plot_14_recipe.ipynb | 2 +-
docs/_downloads/plot_15_recipe.ipynb | 2 +-
docs/_downloads/plot_1_recipe.ipynb | 227 +
docs/_downloads/plot_2_recipe.ipynb | 274 +
docs/_downloads/plot_3_recipe.ipynb | 133 +
docs/_downloads/plot_4_recipe.ipynb | 137 +
docs/_downloads/plot_5_recipe.ipynb | 159 +
docs/_downloads/plot_6_recipe.ipynb | 205 +
docs/_downloads/plot_7_recipe.ipynb | 151 +
docs/_downloads/plot_8_recipe.ipynb | 212 +
docs/_downloads/recipes_jupyter.zip | Bin 107393 -> 106230 bytes
docs/_downloads/recipes_python.zip | Bin 58910 -> 57779 bytes
docs/_images/sphx_glr_plot_01_recipe_001.png | Bin 169961 -> 169961 bytes
docs/_images/sphx_glr_plot_01_recipe_002.png | Bin 80597 -> 80597 bytes
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.../_images/sphx_glr_plot_03_recipe_thumb.png | Bin 63252 -> 63232 bytes
docs/_images/sphx_glr_plot_05_recipe_001.png | Bin 295146 -> 294821 bytes
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docs/_images/sphx_glr_plot_06_recipe_001.png | Bin 127256 -> 127402 bytes
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docs/_images/sphx_glr_plot_09_recipe_001.png | Bin 41929 -> 41772 bytes
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.../_images/sphx_glr_plot_10_recipe_thumb.png | Bin 92019 -> 91957 bytes
docs/_images/sphx_glr_plot_11_recipe_001.png | Bin 3412 -> 3409 bytes
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.../_images/sphx_glr_plot_11_recipe_thumb.png | Bin 4443 -> 4400 bytes
docs/_images/sphx_glr_plot_12_recipe_001.png | Bin 126674 -> 67732 bytes
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.../_images/sphx_glr_plot_12_recipe_thumb.png | Bin 46143 -> 33389 bytes
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.../_images/sphx_glr_plot_13_recipe_thumb.png | Bin 37577 -> 37570 bytes
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.../_images/sphx_glr_plot_14_recipe_thumb.png | Bin 113819 -> 113957 bytes
docs/_images/sphx_glr_plot_15_recipe_001.png | Bin 35754 -> 35754 bytes
docs/_images/sphx_glr_plot_1_recipe_001.png | Bin 0 -> 169961 bytes
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docs/_images/sphx_glr_plot_3_recipe_001.png | Bin 0 -> 169864 bytes
docs/_images/sphx_glr_plot_5_recipe_001.png | Bin 0 -> 294821 bytes
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docs/_images/sphx_glr_plot_6_recipe_002.png | Bin 0 -> 318653 bytes
docs/_images/sphx_glr_plot_6_recipe_003.png | Bin 0 -> 148958 bytes
.../method/cf.NetCDFArray.get_ncvar.rst.txt | 2 +
.../method/cf.NetCDFArray.get_varid.rst.txt | 2 +
docs/_sources/recipes/plot_1_recipe.rst.txt | 2 +-
docs/_sources/recipes/plot_2_recipe.rst.txt | 2 +-
docs/_sources/recipes/plot_3_recipe.rst.txt | 21 +-
docs/_sources/recipes/plot_4_recipe.rst.txt | 2 +-
docs/_sources/recipes/plot_5_recipe.rst.txt | 2 +-
docs/_sources/recipes/plot_6_recipe.rst.txt | 31 +-
.../recipes/sg_execution_times.rst.txt | 18 +-
docs/_static/favicon.ico | Bin 0 -> 2040 bytes
docs/_static/logo.svg | 30362 ++++++++++++++++
docs/aggregation_rules.html | 6 +-
docs/analysis.html | 10 +-
docs/api_reference.html | 6 +-
.../cf.AuxiliaryCoordinate.Data.html | 6 +-
docs/attribute/cf.AuxiliaryCoordinate.T.html | 6 +-
.../cf.AuxiliaryCoordinate.Units.html | 6 +-
docs/attribute/cf.AuxiliaryCoordinate.X.html | 6 +-
docs/attribute/cf.AuxiliaryCoordinate.Y.html | 6 +-
docs/attribute/cf.AuxiliaryCoordinate.Z.html | 6 +-
.../cf.AuxiliaryCoordinate._FillValue.html | 6 +-
.../cf.AuxiliaryCoordinate.add_offset.html | 6 +-
.../cf.AuxiliaryCoordinate.array.html | 6 +-
.../cf.AuxiliaryCoordinate.attributes.html | 6 +-
.../cf.AuxiliaryCoordinate.axis.html | 6 +-
.../cf.AuxiliaryCoordinate.binary_mask.html | 6 +-
.../cf.AuxiliaryCoordinate.bounds.html | 6 +-
.../cf.AuxiliaryCoordinate.calendar.html | 6 +-
.../cf.AuxiliaryCoordinate.cellsize.html | 6 +-
.../cf.AuxiliaryCoordinate.comment.html | 6 +-
...cf.AuxiliaryCoordinate.construct_type.html | 6 +-
.../cf.AuxiliaryCoordinate.ctype.html | 6 +-
.../cf.AuxiliaryCoordinate.data.html | 6 +-
...cf.AuxiliaryCoordinate.datetime_array.html | 6 +-
.../cf.AuxiliaryCoordinate.datum.html | 6 +-
.../attribute/cf.AuxiliaryCoordinate.day.html | 6 +-
.../cf.AuxiliaryCoordinate.dtarray.html | 6 +-
.../cf.AuxiliaryCoordinate.dtvarray.html | 6 +-
.../cf.AuxiliaryCoordinate.dtype.html | 6 +-
.../cf.AuxiliaryCoordinate.hardmask.html | 6 +-
.../cf.AuxiliaryCoordinate.hasbounds.html | 6 +-
.../cf.AuxiliaryCoordinate.hasdata.html | 6 +-
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create mode 100644 docs/_downloads/plot_1_recipe.ipynb
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diff --git a/docs/2_to_3_changes.html b/docs/2_to_3_changes.html
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@@ -24,6 +24,7 @@
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