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1690 Molecularize CIF #1792

Merged
merged 18 commits into from
Feb 19, 2024
Merged

1690 Molecularize CIF #1792

merged 18 commits into from
Feb 19, 2024

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trisyoungs
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@trisyoungs trisyoungs commented Feb 6, 2024

This PR focuses on our CIF import functionality, refactoring a few things here and there and generally making life a bit easier. A bug is fixed in the generation of the supercell whereby individual Species were generated for every molecule instance, and the handling of various output options in the wizard was kinda broken.

It ended up being a bit larger than intended!

Closes #1690.

@trisyoungs trisyoungs marked this pull request as ready for review February 6, 2024 16:20
@trisyoungs trisyoungs requested a review from jws-1 February 6, 2024 16:20
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I really like this piece of work, particularly the introduction of the CIFLocalMolecule class. I think this cleans things up nicely. Some very minor comments, which may be simply my misunderstanding.

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@trisyoungs trisyoungs merged commit 15f2ded into develop Feb 19, 2024
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@trisyoungs trisyoungs deleted the 1690-molecularize-cif branch February 19, 2024 08:58
@trisyoungs trisyoungs added this to the Release 1.5 milestone Feb 19, 2024
rprospero pushed a commit that referenced this pull request Mar 11, 2024
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Molecularize CIF handling a bit better
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