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Dose accumulation for mixed modality results #709

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Jun 27, 2024
Merged

Dose accumulation for mixed modality results #709

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12 changes: 10 additions & 2 deletions matRad_MixedModality.m
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Original file line number Diff line number Diff line change
Expand Up @@ -11,7 +11,7 @@

% beam geometry settings
pln(1).propStf.bixelWidth = 5; % [mm] / also corresponds to lateral spot spacing for particles
pln(1).propStf.gantryAngles = [ -45 0 45 ]; % [?] ;
pln(1).propStf.gantryAngles = [ -45 45 ]; % [?] ;
pln(1).propStf.couchAngles = zeros(numel(pln(1).propStf.gantryAngles),1); % [?] ;
pln(1).propStf.numOfBeams = numel(pln(1).propStf.gantryAngles);
pln(1).propStf.isoCenter = ones(pln(1).propStf.numOfBeams,1) * matRad_getIsoCenter(cst,ct,0);
Expand Down Expand Up @@ -99,6 +99,7 @@
% Fluence optimization
resultGUI = matRad_fluenceOptimizationJO(dij,cst,plnJO);


%% Visualization
slice = 59;

Expand All @@ -118,4 +119,11 @@
subplot(1,3,3);
imagesc(totalPlan(:,:,slice));
matRad_plotVoiContourSlice(gca(f), cst,ct, 1, 1,3,slice);
title('Total Plan');
title('Total Plan');

%% Visualization
if iscell(resultGUI)
[resultGUI, result] = matRad_accumulateCubesMixMod(resultGUI, pln,ct);
end
pln = pln(1)
matRadGUI
59 changes: 59 additions & 0 deletions tools/matRad_accumulateCubesMixMod.m
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Original file line number Diff line number Diff line change
@@ -0,0 +1,59 @@
function [resultGUI, result] = matRad_accumulateCubesMixMod(resultGUI, pln,ct)
% function to merge Mixed modality resultGUI cells into one resultGUI for
% visualisation
%
% call
% [resultGUI, result] = matRad_accumulateCubesMixMod(resultGUI, pln,ct)
%
% input
% resultGUI: matRads resultGUI Cell array from Mixed
% modality optimization
% pln: matRad pln stuct
% ct: matRad ct structure
%
%
% output
% resultGUI: matRads resultGUI struct
%
% %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%
% Copyright 2018 the matRad development team.
%
% This file is part of the matRad project. It is subject to the license
% terms in the LICENSE file found in the top-level directory of this
% distribution and at https://github.com/e0404/matRad/LICENSES.txt. No part
% of the matRad project, including this file, may be copied, modified,
% propagated, or distributed except according to the terms contained in the
% LICENSE file.
%
% %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
matRad_cfg = MatRad_Config.instance();
if ~iscell(resultGUI)
matRad_cfg.dispWarning('resultGUI is already a structure');
return;
end
if numel(pln) ~= numel(resultGUI)
matRad_cfg.dispWarning('dimension mismatch between pln and resultGUI ');
end

quantityOpt = pln(1).bioParam.quantityOpt;
result = resultGUI;
resultGUI = [];
resultGUI.totalQO = zeros(ct.cubeDim);
for mod = 1 : size(result,2)
modName = ['mod', num2str(mod)];
for st = 1 : size(result,1)
stName = ['st',num2str(st)];
fNames = fieldnames(result{st,mod});
for i = 1: numel(fNames)
tn = [modName,stName,fNames{i}];
resultGUI.(tn) = result{st,mod}.(fNames{i});
end
end
tn = [modName quantityOpt];
resultGUI.(tn) = result{st,mod}.(quantityOpt) * pln(mod).numOfFractions;
resultGUI.totalQO = resultGUI.totalQO + resultGUI.(tn);
end


end
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