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Collapse contig coverage graphs #35

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adbeggs opened this issue Jun 6, 2024 · 1 comment
Open

Collapse contig coverage graphs #35

adbeggs opened this issue Jun 6, 2024 · 1 comment

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@adbeggs
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adbeggs commented Jun 6, 2024

Is your feature related to a problem?

No problem, but if you are doing shotgun metagenomics for e.g. human stool samples, there are a lot of contigs!!

Describe the solution you'd like

The ability to collapse them or have the output on a separate page or chooseable like the Pavian sample level output would be very useful

Describe alternatives you've considered

Doing my own pipeline

Additional context

No response

@cjalder
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cjalder commented Jun 6, 2024

Thanks for the suggestion @adbeggs. We're planning an overhaul of the summary report soon, so will definitely take this into account!

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