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test portability #28

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5 tasks
Tracked by #35
sreichl opened this issue Sep 26, 2024 · 0 comments
Open
5 tasks
Tracked by #35

test portability #28

sreichl opened this issue Sep 26, 2024 · 0 comments
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documentation Improvements or additions to documentation

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@sreichl
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sreichl commented Sep 26, 2024

Use one of the recipes as a test case.
Ask collaborators for help ie people with different setups/expertise to run it based on the provided instructions.
Would be great to provide short & simple instructions that are specific to platforms on the wiki.

test on

  • MBpro
    • ideally Apple silicon
    • Expectation: apart from parallelised sequencing pipelines/tasks, everything very fast
    • (Good) enough for competitions in biomedical data science and/or usage without HPC?
    • quick test with unsupervised_analysis module broke at package installtion (Complexheatmap dependencies) because of lack of availability... did not investigate further.
  • AWS
  • Azure
  • Google Cloud
  • ...?
@sreichl sreichl self-assigned this Sep 26, 2024
@sreichl sreichl added the documentation Improvements or additions to documentation label Sep 26, 2024
@sreichl sreichl mentioned this issue Nov 13, 2024
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