CHANGELOG.md

Changelog

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog.

[0.3.4]

Changed

• Adding deprecation warning for find_bouts_individual when both find_min_dict and find_max_dict are used

Fixed

• FishTrajectories.get_bouts no longer ignores find_min_dict, find_max_dict inputs, test updated accordingly.
• Recommended use of FishTrajectories.get_bouts is to use find_min_dict or find_max_dict but not both.
• TrajectoriesWithPoints no longer fails if the value for "setup_points" is None (Issue #39)

[0.3.3]

Added

• Now it is possible to export trajectories to csv

Removed

• Deprecated unused code (average_across_individuals, sum_across_individuals)

Changed

• Removing some deprecation warnings (center_trajectories_and_obtain_radius, center_trajectories_and_normalise) because an alternative is not available yet.
• Adding deprecation warnings (Trajectory.orientation_towards)
• Deprecation warning from from_idtracker (use from_idtrackerai instead)
• Compute arena_center if does not exist in radius_and_center_from_traj_dict

Minor (less important or not affecting user)

• Minor refactoring (find_bouts_individual)
• Black version 20.8
• updated README to warn about the two missing frames due to the computation of the velocity and acceleration.
• created CHANGELOG

[0.3.2] - 2020-07-11

Added

• Added some utilities to perform polar plots to plot/polar.py

Changed

• Changed function names in social_context, and made the per-frame versions public (neighbour_indices_in_frame, adjacency_matrix_in_frame)