From 6327007156b0f0ebc3a1aee3440e59c7e202def0 Mon Sep 17 00:00:00 2001
From: gbouras13 <george.bouras@adelaide.edu.au>
Date: Sun, 12 Jan 2025 22:07:32 +1030
Subject: [PATCH] fix typo

---
 src/dnaapler/utils/all.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/src/dnaapler/utils/all.py b/src/dnaapler/utils/all.py
index d1154d7..fd6fa5c 100644
--- a/src/dnaapler/utils/all.py
+++ b/src/dnaapler/utils/all.py
@@ -262,7 +262,7 @@ def all_process_MMseqs2_output_and_reorient(
                     coverages.append(message)
                     idents.append(message)
                     identitys.append(message)
-                    rotateds.append(rotated)
+                    rotateds.append(message)
 
                 # top hit
                 # prokaryotes can use AUG M, GUG V or UUG L as start codons - e.g. for Pseudomonas aeruginosa PA01  dnaA actually starts with V