Add option to annotate fasta headers with Gene_Reoriented

[ammaraziz]

Thanks for creating and maintaining dnaapler! It's running fantastically well. I had a feature request:

Is your feature request related to a problem? Please describe.
I am running dnaapler all ... as the input contains both plasmids and genomes.

dnaapler outputs fasta headers in the format {contig_name} rotated=True. I want to know which gene (dnaA, repA, etc) was used to reorientate which sequence.

Describe the solution you'd like
The information is captured as it's present in *_summary.tsv file. Fingers crossed this isn't a big ask

Describe alternatives you've considered
NA

Additional context
NA

Thanks!

[gbouras13]

Fixed by v0.5.1 thanks for suggesting this @ammaraziz

[ammaraziz]

Thank you @gbouras13 ! Very helpful