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Copy pathGeneOntology_organism_codes.txt
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GeneOntology_organism_codes.txt
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#Please always check http://www.geneontology.org/gene-associations/ OR http://www.geneontology.org/gene-associations/go_annotation_metadata.all.json for updated organisms and their codes
#organism Description
GeneDB_Lmajor Leishmania major
GeneDB_Pfalciparum Plasmodium falciparum
GeneDB_Tbrucei Trypanosoma brucei
PAMGO_Atumefaciens Agrobacterium tumefaciens str. C58
PAMGO_Ddadantii Dickeya dadantii
PAMGO_Mgrisea Magnaporthe grisea
PAMGO_Oomycetes Oomycetes
aspgd Aspergillus nidulans
cgd Candida albicans
dictyBase Dictyostelium discoideum
ecocyc Escherichia coli
fb Drosophila melanogaster
goa_chicken Gallus gallus
goa_cow Bos taurus
goa_dog Canis lupus familiaris
goa_human Homo sapiens
goa_pdb Protein Data Bank [multispecies]
goa_pig Sus scrofa
goa_ref_chicken Gallus gallus (Reference)
goa_ref_cow Bos taurus (Reference)
goa_ref_dog Canis lupus familiaris (Reference)
goa_ref_human Homo sapiens (Reference)
goa_ref_pig Sus scrofa (Reference)
goa_uniprot_noiea UniProt [multispecies], no IEA annotations
goa_uniprot UniProt [multispecies]
gramene_oryza Oryza sativa
jcvi Comprehensive Microbial Resource [multispecies]
mgi Mus musculus
pombase Schizosaccharomyces pombe
pseudocap Pseudomonas aeruginosa PAO1
rgd Rattus norvegicus
sgd Saccharomyces cerevisiae
sgn Solanaceae
tair Arabidopsis thaliana
wb Caenorhabditis elegans
zfin Danio rerio