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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(aggregated_nn_data_frame)
export(binned_gated_nn_data_frame)
export(collapse_markers)
export(compare_normalized_nearest_neighbor)
export(counts_data_frame)
export(counts_per_mm2_data_frame)
export(counts_per_mm2_sample_data_frame)
export(counts_sample_data_frame)
export(extract_ROI)
export(extract_features)
export(extract_interactions)
export(extract_mask)
export(extract_nearest_neighbor)
export(extract_proximity)
export(feature_selection)
export(get_all_interactions)
export(get_all_nearest_neighbors)
export(get_all_proximities)
export(get_count_ratios)
export(get_counts_per_mm2)
export(get_counts_per_mm2_noncollapsed)
export(get_interactions)
export(get_nearest_neighbors)
export(interaction_counts_data_frame)
export(interaction_counts_sample_data_frame)
export(interaction_maps)
export(interaction_permutation_test)
export(interaction_proportion_comparison_permutation_test)
export(interaction_proportion_data_frame)
export(interactions_sample_data_frame)
export(multiple_proximity_sample_data_frame)
export(neighbor_ray_plot)
export(nn.test)
export(nn_comparison_dataframe)
export(nn_comparison_permutation_test)
export(nn_data_frame)
export(normal_nearest_neighbor)
export(normal_nearest_neighbor_sample)
export(overview_plot)
export(plot_interactions)
export(plot_nearest_neighbor)
export(plot_proximities)
export(proximity_sample_data_frame)
export(rayplot_single_coordinate)
export(read_raw)
export(shuffle_labels)
export(threshold_dataset)
exportMethods(as.data.frame)
exportMethods(plot)
import(RColorBrewer)
import(dplyr)
import(ggplot2)
import(magrittr)
import(tibble)
importFrom(RColorBrewer,brewer.pal)
importFrom(Rcpp,sourceCpp)
importFrom(SpatialTools,dist2)
importFrom(data.table,rbindlist)
importFrom(gplots,colorpanel)
importFrom(grDevices,col2rgb)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(grDevices,png)
importFrom(graphics,arrows)
importFrom(graphics,axis)
importFrom(graphics,barplot)
importFrom(graphics,image)
importFrom(graphics,layout)
importFrom(graphics,legend)
importFrom(graphics,mtext)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(graphics,segments)
importFrom(graphics,text)
importFrom(matrixStats,rowMedians)
importFrom(matrixStats,rowQuantiles)
importFrom(methods,.valueClassTest)
importFrom(methods,new)
importFrom(reshape2,melt)
importFrom(spatstat,nncross)
importFrom(spatstat,owin)
importFrom(spatstat,ppp)
importFrom(spatstat,rgb2hex)
importFrom(spatstat,superimpose)
importFrom(stats,p.adjust)
importFrom(stats,sd)
importFrom(stats,t.test)
importFrom(stats,var)
importFrom(stats,wilcox.test)
importFrom(tiff,readTIFF)
importFrom(tiff,writeTIFF)
importFrom(utils,read.csv)
useDynLib(IrisSpatialFeatures)