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base.py
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import logging
import os
from copy import copy
from typing import Type
from urllib.parse import urlparse
from voluptuous import Any
import dvc.objects as objects
import dvc.prompt as prompt
from dvc.checkout import checkout
from dvc.exceptions import (
CheckoutError,
CollectCacheError,
DvcException,
MergeError,
RemoteCacheRequiredError,
)
from dvc.hash_info import HashInfo
from dvc.objects import save as osave
from dvc.objects.db import NamedCache
from dvc.objects.errors import ObjectFormatError
from dvc.objects.stage import stage as ostage
from ..fs.base import BaseFileSystem
logger = logging.getLogger(__name__)
class OutputDoesNotExistError(DvcException):
def __init__(self, path):
msg = f"output '{path}' does not exist"
super().__init__(msg)
class OutputIsNotFileOrDirError(DvcException):
def __init__(self, path):
msg = f"output '{path}' is not a file or directory"
super().__init__(msg)
class OutputAlreadyTrackedError(DvcException):
def __init__(self, path):
msg = f""" output '{path}' is already tracked by SCM (e.g. Git).
You can remove it from Git, then add to DVC.
To stop tracking from Git:
git rm -r --cached '{path}'
git commit -m "stop tracking {path}" """
super().__init__(msg)
class OutputIsStageFileError(DvcException):
def __init__(self, path):
super().__init__(f"DVC file '{path}' cannot be an output.")
class OutputIsIgnoredError(DvcException):
def __init__(self, match):
lines = "\n".join(match.patterns)
super().__init__(f"Path '{match.file}' is ignored by\n{lines}")
class BaseOutput:
IS_DEPENDENCY = False
FS_CLS = BaseFileSystem
PARAM_PATH = "path"
PARAM_CACHE = "cache"
PARAM_CHECKPOINT = "checkpoint"
PARAM_METRIC = "metric"
PARAM_METRIC_TYPE = "type"
PARAM_METRIC_XPATH = "xpath"
PARAM_PLOT = "plot"
PARAM_PLOT_TEMPLATE = "template"
PARAM_PLOT_X = "x"
PARAM_PLOT_Y = "y"
PARAM_PLOT_X_LABEL = "x_label"
PARAM_PLOT_Y_LABEL = "y_label"
PARAM_PLOT_TITLE = "title"
PARAM_PLOT_HEADER = "header"
PARAM_PERSIST = "persist"
PARAM_DESC = "desc"
PARAM_ISEXEC = "isexec"
PARAM_LIVE = "live"
PARAM_LIVE_SUMMARY = "summary"
PARAM_LIVE_HTML = "html"
METRIC_SCHEMA = Any(
None,
bool,
{
PARAM_METRIC_TYPE: Any(str, None),
PARAM_METRIC_XPATH: Any(str, None),
},
)
DoesNotExistError = OutputDoesNotExistError # type: Type[DvcException]
IsNotFileOrDirError = OutputIsNotFileOrDirError # type: Type[DvcException]
IsStageFileError = OutputIsStageFileError # type: Type[DvcException]
IsIgnoredError = OutputIsIgnoredError # type: Type[DvcException]
sep = "/"
def __init__(
self,
stage,
path,
info=None,
fs=None,
cache=True,
metric=False,
plot=False,
persist=False,
checkpoint=False,
live=False,
desc=None,
isexec=False,
):
self._validate_output_path(path, stage)
# This output (and dependency) objects have too many paths/urls
# here is a list and comments:
#
# .def_path - path from definition in DVC file
# .path_info - PathInfo/URLInfo structured resolved path
# .fspath - local only, resolved
# .__str__ - for presentation purposes, def_path/relpath
#
# By resolved path, which contains actual location,
# should be absolute and don't contain remote:// refs.
self.stage = stage
self.repo = stage.repo if stage else None
self.def_path = path
self.hash_info = HashInfo.from_dict(info)
if fs:
self.fs = fs
else:
self.fs = self.FS_CLS(self.repo, {})
self.use_cache = False if self.IS_DEPENDENCY else cache
self.metric = False if self.IS_DEPENDENCY else metric
self.plot = False if self.IS_DEPENDENCY else plot
self.persist = persist
self.checkpoint = checkpoint
self.live = live
self.desc = desc
self.path_info = self._parse_path(fs, path)
if self.use_cache and self.odb is None:
raise RemoteCacheRequiredError(self.path_info)
self.obj = None
self.isexec = False if self.IS_DEPENDENCY else isexec
def _parse_path(self, fs, path):
if fs:
parsed = urlparse(path)
return fs.path_info / parsed.path.lstrip("/")
return self.FS_CLS.PATH_CLS(path)
def __repr__(self):
return "{class_name}: '{def_path}'".format(
class_name=type(self).__name__, def_path=self.def_path
)
def __str__(self):
return self.def_path
@property
def scheme(self):
return self.FS_CLS.scheme
@property
def is_in_repo(self):
return False
@property
def use_scm_ignore(self):
if not self.is_in_repo:
return False
return self.use_cache or self.stage.is_repo_import
@property
def odb(self):
return getattr(self.repo.odb, self.scheme)
@property
def cache_path(self):
return self.odb.hash_to_path_info(self.hash_info.value).url
def get_hash(self):
if not self.use_cache:
return ostage(
self.repo.odb.local,
self.path_info,
self.fs,
self.fs.PARAM_CHECKSUM,
).hash_info
return ostage(
self.odb, self.path_info, self.fs, self.odb.fs.PARAM_CHECKSUM
).hash_info
@property
def is_dir_checksum(self):
return self.hash_info.isdir
@property
def exists(self):
return self.fs.exists(self.path_info)
def changed_checksum(self):
return self.hash_info != self.get_hash()
def changed_cache(self, filter_info=None):
if not self.use_cache or not self.hash_info:
return True
obj = self.get_obj(filter_info=filter_info)
if not obj:
return True
try:
objects.check(self.odb, obj)
return False
except (FileNotFoundError, ObjectFormatError):
return True
def workspace_status(self):
if not self.exists:
return {str(self): "deleted"}
if self.changed_checksum():
return {str(self): "modified"}
if not self.hash_info:
return {str(self): "new"}
return {}
def status(self):
if self.hash_info and self.use_cache and self.changed_cache():
return {str(self): "not in cache"}
return self.workspace_status()
def changed(self):
status = self.status()
logger.debug(str(status))
return bool(status)
@property
def is_empty(self):
return self.fs.is_empty(self.path_info)
def isdir(self):
return self.fs.isdir(self.path_info)
def isfile(self):
return self.fs.isfile(self.path_info)
# pylint: disable=no-member
def ignore(self):
if not self.use_scm_ignore:
return
if self.repo.scm.is_tracked(self.fspath):
raise OutputAlreadyTrackedError(self)
self.repo.scm.ignore(self.fspath)
def ignore_remove(self):
if not self.use_scm_ignore:
return
self.repo.scm.ignore_remove(self.fspath)
# pylint: enable=no-member
def save(self):
if not self.exists:
raise self.DoesNotExistError(self)
if not self.isfile and not self.isdir:
raise self.IsNotFileOrDirError(self)
if self.is_empty:
logger.warning(f"'{self}' is empty.")
self.ignore()
if self.metric or self.plot:
self.verify_metric()
if not self.use_cache:
self.hash_info = self.get_hash()
if not self.IS_DEPENDENCY:
logger.debug(
"Output '%s' doesn't use cache. Skipping saving.", self
)
return
assert not self.IS_DEPENDENCY
if not self.changed():
logger.debug("Output '%s' didn't change. Skipping saving.", self)
return
self.obj = ostage(
self.odb, self.path_info, self.fs, self.odb.fs.PARAM_CHECKSUM
)
self.hash_info = self.obj.hash_info
self.isexec = self.isfile() and self.fs.isexec(self.path_info)
def set_exec(self):
if self.isfile() and self.isexec:
self.odb.set_exec(self.path_info)
def commit(self, filter_info=None):
if not self.exists:
raise self.DoesNotExistError(self)
assert self.hash_info
if self.use_cache:
obj = ostage(
self.odb,
filter_info or self.path_info,
self.fs,
self.odb.fs.PARAM_CHECKSUM,
)
objects.save(self.odb, obj)
checkout(
filter_info or self.path_info,
self.fs,
obj,
self.odb,
relink=True,
)
self.set_exec()
def dumpd(self):
ret = copy(self.hash_info.to_dict())
ret[self.PARAM_PATH] = self.def_path
if self.IS_DEPENDENCY:
return ret
if self.desc:
ret[self.PARAM_DESC] = self.desc
if not self.use_cache:
ret[self.PARAM_CACHE] = self.use_cache
if isinstance(self.metric, dict):
if (
self.PARAM_METRIC_XPATH in self.metric
and not self.metric[self.PARAM_METRIC_XPATH]
):
del self.metric[self.PARAM_METRIC_XPATH]
if self.metric:
ret[self.PARAM_METRIC] = self.metric
if self.plot:
ret[self.PARAM_PLOT] = self.plot
if self.persist:
ret[self.PARAM_PERSIST] = self.persist
if self.checkpoint:
ret[self.PARAM_CHECKPOINT] = self.checkpoint
if self.isexec:
ret[self.PARAM_ISEXEC] = self.isexec
if self.live:
ret[self.PARAM_LIVE] = self.live
return ret
def verify_metric(self):
raise DvcException(f"verify metric is not supported for {self.scheme}")
def download(self, to, jobs=None):
self.fs.download(self.path_info, to.path_info, jobs=jobs)
def get_obj(self, filter_info=None):
if self.obj:
obj = self.obj
elif self.hash_info:
try:
obj = objects.load(self.odb, self.hash_info)
except FileNotFoundError:
return None
else:
return None
if filter_info and filter_info != self.path_info:
prefix = filter_info.relative_to(self.path_info).parts
obj = obj.filter(self.odb, prefix)
return obj
def checkout(
self,
force=False,
progress_callback=None,
relink=False,
filter_info=None,
allow_missing=False,
checkpoint_reset=False,
**kwargs,
):
if not self.use_cache:
if progress_callback:
progress_callback(
str(self.path_info), self.get_files_number(filter_info)
)
return None
obj = self.get_obj(filter_info=filter_info)
if not obj and (filter_info and filter_info != self.path_info):
# backward compatibility
return None
if self.checkpoint and checkpoint_reset:
if self.exists:
self.remove()
return None
added = not self.exists
try:
modified = checkout(
filter_info or self.path_info,
self.fs,
obj,
self.odb,
force=force,
progress_callback=progress_callback,
relink=relink,
**kwargs,
)
except CheckoutError:
if allow_missing or self.checkpoint:
return None
raise
self.set_exec()
return added, False if added else modified
def remove(self, ignore_remove=False):
self.fs.remove(self.path_info)
if self.scheme != "local":
return
if ignore_remove:
self.ignore_remove()
def move(self, out):
# pylint: disable=no-member
if self.scheme == "local" and self.use_scm_ignore:
self.repo.scm.ignore_remove(self.fspath)
self.fs.move(self.path_info, out.path_info)
self.def_path = out.def_path
self.path_info = out.path_info
self.save()
self.commit()
if self.scheme == "local" and self.use_scm_ignore:
self.repo.scm.ignore(self.fspath)
def transfer(
self, source, odb=None, jobs=None, update=False, no_progress_bar=False,
):
from dvc.fs import get_cloud_fs
if odb is None:
odb = self.odb
from_fs = get_cloud_fs(self.repo, url=source)
from_info = from_fs.path_info
# When running import-url --to-remote / add --to-remote/-o ... we
# assume that it is unlikely that the odb will contain majority of the
# hashes, so we transfer everything as is (even if that file might
# already be in the cache) and don't waste an upload to scan the layout
# of the source location. But when doing update --to-remote, there is
# a high probability that the odb might contain some of the hashes, so
# we first calculate all the hashes (but don't transfer anything) and
# then only update the missing cache files.
upload = not (update and from_fs.isdir(from_info))
jobs = jobs or min((from_fs.jobs, odb.fs.jobs))
obj = ostage(
odb,
from_info,
from_fs,
"md5",
upload=upload,
jobs=jobs,
no_progress_bar=no_progress_bar,
)
osave(odb, obj, jobs=jobs, move=upload)
self.hash_info = obj.hash_info
return obj
def get_files_number(self, filter_info=None):
if not self.use_cache or not self.hash_info:
return 0
if not self.hash_info.isdir:
return 1
if not filter_info or filter_info == self.path_info:
return self.hash_info.nfiles or 0
obj = self.get_obj(filter_info=filter_info)
return len(obj) if obj else 0
def unprotect(self):
if self.exists:
self.odb.unprotect(self.path_info)
def get_dir_cache(self, **kwargs):
if not self.is_dir_checksum:
raise DvcException("cannot get dir cache for file checksum")
try:
objects.check(self.odb, self.odb.get(self.hash_info))
except (FileNotFoundError, ObjectFormatError):
self.repo.cloud.pull(
NamedCache.make("local", self.hash_info.value, str(self)),
show_checksums=False,
**kwargs,
)
try:
self.obj = objects.load(self.odb, self.hash_info)
except (FileNotFoundError, ObjectFormatError):
self.obj = None
return self.obj
def collect_used_dir_cache(
self, remote=None, force=False, jobs=None, filter_info=None
):
"""Get a list of `info`s related to the given directory.
- Pull the directory entry from the remote cache if it was changed.
Example:
Given the following commands:
$ echo "foo" > directory/foo
$ echo "bar" > directory/bar
$ dvc add directory
It will return a NamedCache like:
nc = NamedCache()
nc.add(self.scheme, 'c157a79031e1', 'directory/foo')
nc.add(self.scheme, 'd3b07384d113', 'directory/bar')
"""
cache = NamedCache()
try:
self.get_dir_cache(jobs=jobs, remote=remote)
except DvcException:
logger.debug(f"failed to pull cache for '{self}'")
try:
objects.check(self.odb, self.odb.get(self.hash_info))
except (FileNotFoundError, ObjectFormatError):
msg = (
"Missing cache for directory '{}'. "
"Cache for files inside will be lost. "
"Would you like to continue? Use '-f' to force."
)
if not force and not prompt.confirm(msg.format(self.path_info)):
raise CollectCacheError(
"unable to fully collect used cache"
" without cache for directory '{}'".format(self)
)
return cache
path = str(self.path_info)
filter_path = str(filter_info) if filter_info else None
for entry_key, entry_obj in self.obj:
entry_path = os.path.join(path, *entry_key)
if (
not filter_path
or entry_path == filter_path
or entry_path.startswith(filter_path + os.sep)
):
cache.add(self.scheme, entry_obj.hash_info.value, entry_path)
return cache
def get_used_cache(self, **kwargs):
"""Get a dumpd of the given `out`, with an entry including the branch.
The `used_cache` of an output is no more than its `info`.
In case that the given output is a directory, it will also
include the `info` of its files.
"""
if not self.use_cache:
return NamedCache()
if self.stage.is_repo_import:
cache = NamedCache()
(dep,) = self.stage.deps
cache.external[dep.repo_pair].add(dep.def_path)
return cache
if not self.hash_info:
msg = (
"Output '{}'({}) is missing version info. "
"Cache for it will not be collected. "
"Use `dvc repro` to get your pipeline up to date.".format(
self, self.stage
)
)
if self.exists:
msg += (
"\n"
"You can also use `dvc commit {stage.addressing}` "
"to associate existing '{out}' with {stage}.".format(
out=self, stage=self.stage
)
)
logger.warning(msg)
return NamedCache()
ret = NamedCache.make(self.scheme, self.hash_info.value, str(self))
if not self.is_dir_checksum:
return ret
ret.add_child_cache(
self.hash_info.value, self.collect_used_dir_cache(**kwargs),
)
return ret
@classmethod
def _validate_output_path(cls, path, stage=None):
from dvc.dvcfile import is_valid_filename
if is_valid_filename(path):
raise cls.IsStageFileError(path)
if stage:
abs_path = os.path.join(stage.wdir, path)
if stage.repo.fs.dvcignore.is_ignored(abs_path):
check = stage.repo.fs.dvcignore.check_ignore(abs_path)
raise cls.IsIgnoredError(check)
def _check_can_merge(self, out):
if self.scheme != out.scheme:
raise MergeError("unable to auto-merge outputs of different types")
my = self.dumpd()
other = out.dumpd()
ignored = [
self.fs.PARAM_CHECKSUM,
HashInfo.PARAM_SIZE,
HashInfo.PARAM_NFILES,
]
for opt in ignored:
my.pop(opt, None)
other.pop(opt, None)
if my != other:
raise MergeError(
"unable to auto-merge outputs with different options"
)
if not out.is_dir_checksum:
raise MergeError(
"unable to auto-merge outputs that are not directories"
)
def merge(self, ancestor, other):
from dvc.objects.tree import merge
assert other
if ancestor:
self._check_can_merge(ancestor)
ancestor_info = ancestor.hash_info
else:
ancestor_info = None
self._check_can_merge(self)
self._check_can_merge(other)
self.hash_info = merge(
self.odb, ancestor_info, self.hash_info, other.hash_info
)