From 2114b1d2ad7b31729bf9f627b49ae49f177471d8 Mon Sep 17 00:00:00 2001 From: noordhee Date: Fri, 14 Feb 2025 09:49:40 +0100 Subject: [PATCH 1/2] update on do_index() function in indexing.py file --- ImageD11/indexing.py | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/ImageD11/indexing.py b/ImageD11/indexing.py index 65866a9d..395db5c7 100644 --- a/ImageD11/indexing.py +++ b/ImageD11/indexing.py @@ -1358,7 +1358,10 @@ def do_index( cf_for_indexing = cf.copyrows(pkmask) cf_for_indexing.parameters = cf.parameters - indexer = indexer_from_colfile(cf_for_indexing) + if unitcell: + indexer = indexer_from_colfile_and_ucell(cf, ucell=unitcell) + else: + indexer = indexer_from_colfile(cf_for_indexing) indexer.ds_tol = dstol indexer.assigntorings() From db286f4a78b9ee4cb72b9626da285bf1133923a7 Mon Sep 17 00:00:00 2001 From: noordhee Date: Fri, 14 Feb 2025 11:51:47 +0100 Subject: [PATCH 2/2] update on do_index() function in indexing.py file --- ImageD11/indexing.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ImageD11/indexing.py b/ImageD11/indexing.py index 395db5c7..8ae41d25 100644 --- a/ImageD11/indexing.py +++ b/ImageD11/indexing.py @@ -1359,7 +1359,7 @@ def do_index( cf_for_indexing.parameters = cf.parameters if unitcell: - indexer = indexer_from_colfile_and_ucell(cf, ucell=unitcell) + indexer = indexer_from_colfile_and_ucell(cf_for_indexing, ucell=unitcell) else: indexer = indexer_from_colfile(cf_for_indexing) indexer.ds_tol = dstol