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About data folder #3

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Bigrock-dd opened this issue Mar 10, 2020 · 2 comments
Open

About data folder #3

Bigrock-dd opened this issue Mar 10, 2020 · 2 comments

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@Bigrock-dd
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I still don't know how to create data folder after reading the previous questions,and i want to know how the files in the folder are generated and what the format is.
could you answer my question?
Many thanks!!!

@jaechanglim
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It would be better to answer your question if you ask more specific questions. The format is pickle file and each pickle file is the tuple of two rdkit objects about a protein and a ligand

@agave233
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agave233 commented Aug 5, 2020

It would be better to answer your question if you ask more specific questions. The format is pickle file and each pickle file is the tuple of two rdkit objects about a protein and a ligand

Hi,I'm also confused about these two objects, do you use rdkit to read pdb file and sdf file (in PDBbind dataset)? It would be perfect if you upload your preprocess code.

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