Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Compilation issue #6

Open
kdanielmorais opened this issue Dec 8, 2017 · 0 comments
Open

Compilation issue #6

kdanielmorais opened this issue Dec 8, 2017 · 0 comments

Comments

@kdanielmorais
Copy link

Hello Jim,
I am trying the unique_headers.pl but unsuccessfully. I am using the WSL version for windows and after following the instructions for compilation, I still get the following error:
"
unique_headers.pl --help
Can't locate ReadFastx.pm in @inc (you may need to install the ReadFastx module) (@inc contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/local/bin/unique_headers.pl line 31.
BEGIN failed--compilation aborted at /usr/local/bin/unique_headers.pl line 31.
"
After cloning the repository and using the "perl Makefile.PL PREFIX=$HOME" I get the following errors:

Warning: prerequisite Class::XSAccessor 0 not found.
Warning: prerequisite Inline 0 not found.
Warning: prerequisite List::MoreUtils 0 not found.
Warning: prerequisite Moose 0 not found.
Warning: prerequisite MooseX::NonMoose 0 not found.
Warning: prerequisite Readonly 0 not found.
Warning: prerequisite Term::ProgressBar 0 not found.
Warning: prerequisite namespace::autoclean 0 not found.
Generating a Unix-style Makefile
Writing Makefile for fasta_utilities
Writing MYMETA.yml and MYMETA.json

After that, make and make install look fine.
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/absolute_coordinates.pl
cp scripts/wrap.pl blib/script/wrap.pl
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/wrap.pl
Manifying 40 pod documents
Manifying 22 pod documents

make install
"Appending installation info to /home/moraisd/lib/x86_64-linux-gnu/perl/5.22.1/perllocal.pod"

But I still get the error.

Could you show me how to solve it? Thanks.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant